Lates calcarifer (barramundi perch): 108894765
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Entry
108894765 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: IQ domain-containing protein E
KO
K24677
IQ domain-contaning protein E
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108894765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108894765
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
EVC complex
108894765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
APG6_N
Wtap
DivIC
Motif
Other DBs
NCBI-GeneID:
108894765
NCBI-ProteinID:
XP_018548886
UniProt:
A0AAJ7Q7I8
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Position
LG5:complement(5598080..5608195)
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AA seq
730 aa
AA seq
DB search
MFNATAKMSLEASDFQTDEDCEELADDGFSFSADFLEKQRTQRKRSSGKPPPSPRSPYLS
SLNVNPRRAAVAAWRLPRASLGDTRRESTGESGSARLTSLSNGHDLSQTLRSECDVMPEL
LKQTLSMRKHKHLHSASNGFTFGTGDYREKEDMYDEIIRLKKSLQAQKSDNQKMKAKLRR
LEEDNAKREKQIEELLDPTKGSEYTRSLVDKKKEGSVVLNGLKQRILKLEQQCREKENAL
SKLQSELRTTNLEELKITVETYFEEIQRLRMLLEAAEKSSRAESKCSQRQQRALSSTVHR
LTENLKQLQQENTALREELNTDSPAGGIKGYRDWSKQRLLRRLLEVEKRPEDGRRHAQSA
KSSGRLDQEVQATPAEILGFTMATEAVVSVGTITEEGEEVSDLRERFSQLEKERVELQET
LSSKDDELRQLRTEREKLEKETEQWKAEQTNEWNKQHKEELEQLWSRIQTLEDDKLKPAQ
AELSSLSPTTAVDCEDSPSRSGVKEGEEGDAEGGEKEGERHEDLGEDAEEKRSMRRQHEE
REKAARAIQTNWREHRNRDIVMLQSALRGHLLRESKLKDLLKDTQNKVVEATSRSDVASS
EGGEMDVVALTMIQSAFRGHLARCSLSTESSGFSVPSLVGNSLPMLVPRTHSTTSRTDAA
SVHNEEKKQGDEDSWPVSSTHASRLTPTTDQTELHCTAESGGAAAIDSDDSDDIIVSPSR
PLRSREVLIL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgcgactgctaaaatgtctctggaggcgagcgattttcaaacagatgaagac
tgcgaggagctggctgatgatggcttctctttctcggctgattttttggaaaagcagaga
acacagaggaaacgatcttctgggaagcctcctccctctccaaggtctccgtacctctcc
agcctgaatgtgaaccccagaagagcagcagtggcggcttggagattaccaagggcgtcc
ctgggggacacccggcgagaaagtactggggagagtggttcagctcgtctcacatccctc
agcaacggccatgatctgtcccagacgctgagatcagagtgtgacgtcatgccagagctt
ctcaaacagactttgagcatgaggaaacacaaacatctccactctgcatccaatggcttt
acttttggcacaggtgactacagagagaaggaggacatgtatgatgagattattcgcctc
aagaagagtctccaggcgcagaagtctgacaaccagaaaatgaaagccaaactacgccgc
ctggaggaggataacgctaaaagagagaagcagatagaagaactgctggatcccactaaa
ggatctgagtatactcgtagtttggtggataagaaaaaagaagggagtgtggttctcaat
gggctgaagcagagaatcctgaagttggagcagcagtgtagagagaaagaaaatgccctg
agtaaactgcaaagtgaactgaggaccaccaacctggaggagctgaagatcacagtagaa
acctactttgaagagatccagagactgaggatgctgctagaagctgcagagaaaagtagt
cgagcagagagtaaatgctcccagaggcagcagagagctttgagctccacggttcatcgt
ctgacggagaacctgaagcagctccaacaggagaacacggcactgagagaagaactcaac
actgacagtcctgctggaggaatcaaaggttacagagactggagtaaacagagactgttg
cgaaggctgttagaagtggagaagaggccggaggacggcagaagacacgcccagtcggcg
aagagcagcggccgattggatcaggaggtccaggccacacccgctgagattctggggttt
accatggcaacagaggcagtggtctccgtgggaacaatcactgaagaaggggaggaggtt
tcagatctgagagaacgcttcagccaattggagaaggagagggtggagctacaggagaca
ttgtcaagtaaagatgatgagctcagacagttgaggacagaaagggaaaaactggagaaa
gaaacagagcaatggaaggctgaacaaacaaatgaatggaataagcagcataaagaggaa
ctggaacagttgtggtcaaggatccaaactctggaggacgacaaactcaaacccgcacaa
gctgagctctcctcactctcccccacaacggcagtggactgtgaggacagtccaagcaga
tcaggtgtgaaggagggtgaggagggggacgctgaaggtggagagaaagaaggggaaaga
catgaggatttgggtgaagatgcagaggagaagaggagtatgagaaggcaacatgaagaa
agagagaaagcggcaagggccatccagacaaactggagggagcacagaaatagggacatt
gtgatgttgcagtcagcactaagaggccatctcctcagagagtccaagctcaaggacctg
ctgaaagacacacagaataaggttgtagaagcaacaagccgcagtgatgtagcttcctct
gaaggtggggagatggatgtggttgccttgacgatgatacagtctgcattcaggggacac
ctggctcgctgtagtctttcaacagaaagctcagggttctccgtgccttctctagtggga
aacagtttgcccatgctggtaccaagaactcactcaacaaccagcagaacagatgctgca
tccgtccataacgaggagaaaaagcagggtgatgaagactcatggcctgtctctagcact
catgcctccaggttgacacccacaacagaccaaacagagctccactgcacagctgagtct
ggaggagccgctgcaatcgattctgatgattctgatgatatcattgtgtctccatcacgc
cctctgagaagcagagaagtcttaatcttatag
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