Lates calcarifer (barramundi perch): 108894782
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Entry
108894782 CDS
T04895
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108894782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108894782
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108894782
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108894782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-UDP
zf_RING_Vps8
PHD_NSD
zf-C3HC4_2
PHD
zf-RING_4
zf-C3HC4_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108894782
NCBI-ProteinID:
XP_018548901
UniProt:
A0AAJ7VE17
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFGHCCRKTTKKQVRKGKTPEEVVKKYL
QKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSRAESVGRLAQCGHQYHFQCLVAMYNNG
NKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGLEH
PNPGKPFTARGFPRHCYLPDSDKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEV
HHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEDDGLMEK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgccgctctgcccgtgtgtctaactaggcctcctaaactcgtgctgcaccct
ccgcctgttagcaaaagtgacatcaaaccagtgccaggatttggccactgttgcaggaag
accactaagaaacaagttcgcaagggtaaaactccagaggaggtggtaaagaaataccta
cagaaagttaaaagtccaccagaggaggactgtaccatctgtatggagccattggggggt
ccatctggatacaaaggtccaggggtagggcctgtttctagggcagagtcagttgggcga
ctagcacagtgtggacaccagtaccatttccagtgtctggtggccatgtataacaatggc
aacaaggacggcagtcttcagtgtcccacttgtaaaaccatctacggcgtaaagacaggc
aaccaaccggcagggaagatggaataccacgtcatccctcattctctaccagggcaccct
gactgcaaaaccatacgcatcatctacaacataccaccaggcattcagggactagagcat
ccaaacccagggaagcccttcactgccagaggctttccccgacactgctacctcccagac
agcgacaaaggacgcaaggtgctgagactgctcctagtagcgtgggaccgcaggttgatc
ttttcagttggtacttcgagcactacgggagaatctgacactgtcatctggaatgaggtc
caccataagacagagtttggctccaacctgacgggccacggcttccccgaccctggacac
ctcgacaacgttctggaagagcttcgagctcagggcatcacagaggatgatggactgatg
gaaaagtga
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