Lates calcarifer (barramundi perch): 108894784
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Entry
108894784 CDS
T04895
Name
(RefSeq) rab11 family-interacting protein 4A isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108894784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894784
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108894784
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
EF-hand_1
EF-hand_6
EF-hand_8
bZIP_2
DUF4852
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
108894784
NCBI-ProteinID:
XP_018548904
UniProt:
A0A4W6FUB3
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All DBs
Position
LG11:complement(22189669..22244139)
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AA seq
616 aa
AA seq
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MKKNTAPADEASCAMEGHVFPDQEQLLQFLRRLKEVFDVCDEDADGFIRVEHLVDLGLQF
GQGDEVKALSRYLDPNADGKINFKDFCHGVFAIKGCEEILKMAVGPRSATSNQPSVTDNG
YIYQDGEARLGAPIIMCTRSYPECRVYSEGCGADGECDMDSSTENTNGSDFLDPTRKDSH
LTCSASASVISGEEQFEDYGEGEDVDFIPSSPCPEDDNRTNGFSDLGSSLPSSAGQTPQK
MRQLYNSELLDIYCSQCCKKVNLLNDLEARLRNLKANSPNRKISSTAFGRQLFQANHSVF
GSSQGSSTEDLFTDSIDSCDLDITEKVSYLEKKVTELESDSLANGDLKSKLKQENTQLVH
RVHELEEQVKDAEARADQSLEEETKRHREVYSKMDRDRNIEIDLLCNRLQLLEEENGEMK
LNVCRLKSQTEKLDQEKQRMTDKLEDTSLRLKDEIDLYRKIMDKLWHNRHEFQKEKEAMQ
ELIDDLRRELEYLQLFKLEMEHPGKGKGLSEYNAKTRENEMEHEVKRLKQENHKLRDQND
DLNAQILSLSLYEAKNLFSCHTKAQCLAAEIDNASRDELVDALKEQEEINLRLRQYMDKI
ILAILDHNPSILEIKS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatacggctcccgccgacgaagccagttgtgcaatggaaggacatgttttt
cccgaccaagagcagctattgcagtttctgaggaggctcaaagaggttttcgacgtgtgt
gacgaggatgctgacggcttcatccgggtggagcacttagtggatctcggtcttcagttc
ggccaaggagacgaggtgaaggccttgtccaggtacctggatcctaacgctgatgggaaa
atcaacttcaaagacttttgtcatggtgtgtttgctatcaaaggttgtgaggagatactg
aagatggctgtgggccctcgcagtgctacctccaaccagccatctgttactgacaatggt
tacatttaccaggacggtgaggccaggctgggagctccgattatcatgtgtactcggtcc
tatccagagtgcagagtgtacagtgagggttgtggggctgacggggagtgtgacatggac
agcagcactgaaaacaccaacggctctgactttttggacccaacaaggaaagacagccac
ctcacttgctcagcatctgcttccgtcatctccggggaggagcagtttgaggactatggt
gaaggggaagatgtggatttcattcccagcagtccctgccctgaggatgacaaccgaaca
aatggcttctcagacctgggttcctcgctcccctctagtgctgggcagactcctcagaag
atgcggcagctgtataacagtgaactgctggacatctactgttctcagtgctgcaagaaa
gtgaatctactcaatgacctggaggctcgacttcgaaacctcaaggccaacagccctaac
agaaagatttccagcacagcatttggacgtcagctgttccaggccaaccacagtgtgttt
gggtccagtcagggcagcagcacagaggatctgttcacagacagcattgactcctgtgac
ctcgacatcacagagaaagtcagttatctggagaagaaggtgacagagctggaaagtgac
agtctggccaacggtgacctcaagtctaaactcaaacaggaaaacacacaattagtccac
agggtccatgagctggaggagcaggtgaaggatgcagaggcgagggcagatcagagtctg
gaggaggagaccaagagacatcgggaggtttacagcaagatggacagagacagaaacata
gagatcgacctgctctgtaacagattacagctgttggaagaagaaaatggagagatgaag
ttaaatgtgtgcagactcaagtctcagacagagaaactggaccaggagaagcagaggatg
acagacaagctggaggacactagtctgaggctgaaagatgagatagacctgtacaggaag
ataatggacaagctctggcataaccggcatgagtttcagaaggaaaaagaggccatgcag
gagctgattgatgatctgcgccgagagctggagtatctgcagctgtttaagctggagatg
gaacatcctgggaaggggaaggggctatcagagtataacgccaagaccagggagaatgaa
atggaacatgaagtcaagagactgaaacaggagaatcataagctgcgggatcagaacgat
gatctgaatgctcagattctcagtctgagtttgtatgaggctaagaacctgttttcctgt
cataccaaggcccagtgcctggcagccgagattgacaacgcatccagagacgagctggta
gatgccttgaaggagcaggaggagatcaatctgcgtctgagacagtacatggacaaaatc
attctggccatcctcgaccataacccctctattctggagatcaagagttaa
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