Lates calcarifer (barramundi perch): 108894803
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Entry
108894803 CDS
T04895
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf00071
Fatty acid degradation
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
lcf04216
Ferroptosis
lcf04920
Adipocytokine signaling pathway
Module
lcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108894803
00071 Fatty acid degradation
108894803
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108894803
09143 Cell growth and death
04216 Ferroptosis
108894803
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108894803
03320 PPAR signaling pathway
108894803
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108894803
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108894803
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108894803
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108894803
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108894803
Exosomal proteins of breast cancer cells
108894803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108894803
NCBI-ProteinID:
XP_018548925
UniProt:
A0AAJ8AZ34
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All DBs
Position
LG23:complement(14689573..14700168)
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AA seq
682 aa
AA seq
DB search
MEFLFQLLFSPLPTPAIISLFALAAATLFYLNTRPSPVRNPADLKRQTLGIKDGARKTAL
LEGNNNLISYCYEEAKTIYEVFQRGLKVSGNGPCLGYRKPGRPYQWLKYKQVSDRAEHLG
SGLLHRGLKPNQDTFIGIFAQNRPEWIIGELACYTYSMVAVPLYDTLGPEALVFIIDRAE
ISTVLCDNQKKAETLLQNREKGQSAALKTIIIMDPFNSELVERGTKCGVDIVSLQDVEAL
GKSNLQKPIPPRPEDLSIVCFTSGTTGDPKGAMLTHENVVSDAAGVIKSFESSVVPNTQD
VSISFLPLAHMFERVVQTVMYGAGARVGFFQGDIRLLPDDMKTLQPTIFPVVPRLLNRVY
DKVQSGAKSPFKKWLLNFAVDRKYSEVKEGIIRNNSIWDKLIFHKVQESLGGRVRVMVTG
AAPISPSVLNFLRAALGCQIFEAYGQTECTAGCTFTMPGDATSGHVGTPLPCNIVKLVDV
EEMNYFASNGEGEVCIKGRNVFKGYLKDPEKTAEALDKDGWLHTGDIGKWLPSGVLKIID
RKKNIFKLAQGEYIAPEKIENVYVRSGPVAQVFVHGDSLQSCLVAIVVPDPEVLPGFAKS
LGCQGSIEDLCKNTEIKKAILSDMIKLGKEAGLKSFEQVKDVYLHPEQFTIENGLLTPTL
KAKRAELKALFQSQIDKLYANM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggagttcctgttccagttgctgttctcccctctcccgaccccggccatcatctccctg
ttcgccctggcggctgccaccctgttttacctcaacacacggcctagtcctgtccgcaac
cctgccgacctcaaacgccaaactctggggatcaaggacggagcaagaaaaactgctttg
cttgagggcaacaataacctgatatcctactgctatgaagaagccaagaccatctatgag
gtttttcagagggggctgaaagtttcaggtaatggaccatgcttaggctacagaaaacca
ggaaggccataccagtggctgaaatacaaacaggtgtctgatcgagcagagcacctgggg
tcagggctgcttcatcgaggtttgaagccaaaccaggacactttcattggcatctttgct
cagaatagacctgaatggattattggtgaattggcctgttacacctactccatggtggcc
gttcccctgtacgacaccctgggtcctgaagctcttgtgttcattatcgacagagcggag
atctccacagtgctttgtgacaatcaaaagaaagcagaaacactgctgcagaatcgggag
aaaggccagagtgctgctctcaaaaccatcatcatcatggaccctttcaactccgagttg
gtcgagagaggaaccaagtgtggggtggacattgtttccctgcaggatgtggaggctctg
gggaaaagcaatcttcaaaagccaattccaccacggccagaggaccttagtattgtttgt
ttcaccagtggtacaacaggagaccctaagggagcaatgctgacccatgagaatgtggtc
tctgatgctgcaggcgtcatcaaaagctttgagtcatcagttgttccaaatacccaggat
gtcagcatttcattcctgcctttagcgcacatgtttgagagagtcgtacagacagtgatg
tacggtgctggggccagagtgggattcttccagggtgacatcagactgctgccagatgac
atgaaaaccctgcagcccaccattttcccagtagttcctcgcctcctcaaccgtgtctat
gacaaagtccagagtggggccaagtcgcctttcaagaaatggctcctgaactttgctgtg
gacaggaaatattctgaggtcaaggagggcatcatcaggaacaacagcatatgggataag
ctcatcttccacaaagtccaggagtccctgggggggcgtgtgcgggtcatggtgactgga
gcagctcccatatctccctctgttctcaacttcctcagggctgctctgggctgtcagatc
tttgaggcgtacggccagacagagtgcacagccggctgcaccttcaccatgccaggagat
gccacttcagggcatgttggaacaccactgccctgcaatattgtgaagttggtggatgtt
gaagaaatgaactactttgcttcaaatggtgaaggggaggtctgtatcaagggtagaaat
gtgttcaaggggtacttgaaagacccagagaagactgcagaggccttggataaagacggt
tggctccacactggggacattggaaaatggcttccgagtggagttctgaagattattgac
cgaaagaagaacatctttaagctggctcagggggagtacatagcaccagaaaagattgag
aatgtgtatgtccgcagtggacctgtggcccaggtatttgtgcatggagacagtcttcag
tcttgcctggttgccattgtggtccctgatcctgaggtcctgccaggttttgccaaaagt
ctggggtgccaaggctccattgaagacctctgcaaaaacacagaaattaagaaagccatt
ctttcagacatgatcaaactgggcaaagaagcggggctcaagtcctttgagcaggtgaaa
gatgtttacctccatccagagcagttcaccattgaaaatggcctgttaacacccacactc
aaggctaagagggctgagctgaaagctctcttccagtcacagattgacaaactctacgct
aacatgtaa
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