Lates calcarifer (barramundi perch): 108894857
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Entry
108894857 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108894857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108894857
04131 Membrane trafficking [BR:
lcf04131
]
108894857
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108894857
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108894857
Autophagy
Mitophagy
Other mitophagy associated proteins
108894857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
108894857
NCBI-ProteinID:
XP_018548996
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MNSLSFDDPSLDNLDPTLSLNDPSDIDTALLSDIDDMLQLINNQDMEFGGLFDNPPYTGP
PPTQELPGLTQSITSAAPPATTTTPSPSSSSSILSSSPHLDALLGPPITRSSSTPDKAFQ
PPTFQQSPLAQVPSSTPRQQPASPQQAQTLRQPQVEQPQPILSPTAPAQAASPHGSPGPS
PVFSSTPQALFTSPAPQTPLQAQPQTQTQTQLQAQAQPQQARTNYSNQNNYTAGSPGNVS
QPATSLPSSPPSVQPVAIQTQLQGLTTTSSLLATSASPPVQTIAPHVQQVPVLLQPQFIK
AESLLLTTLKHDPCMVTTVASPTSLATTTTPVQSTSLQAFMGGGTILTTVPVMVDTEKLP
INRIAISSKPAGQPHKGEKRTAHNAIEKRYRSSINDKIVELKDLVAGTEAKLNKSAVLRK
AIDYIRYLQQANQKLKQENMALKMAAQKNKSLKDLVAMEVDGQSDVKNELPTPPASDVGS
PTSFSHCGSDSEPDSPMGEDTKPNVGMLDGSAAGGSAGGMLDRSRMALCAFTFLFLSLNP
LAALLCSSGSSSAGSTAATTTHHAGRSVLGVHIAADSWGWMDWMLPTILVWLLNGILVSG
VLIRLLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTS
QLDLACAALWSLLRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSSRDAALVYHRLHQL
HMTGKLNGSHLSAVHMALSAVNLAECSGSCLPVATLAEVYVSAALRVKASLPRILHFTSR
VFLSSARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLA
QVTQAFREHLLEKALYCVAQPHGEKSSSQGEGEYADALEYLQLLISASDAAGATSQSFAI
GSNMATVTGCDPHSKWWSSVAVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKAC
LNTFRAVRALLSKPENCQLSLSYSDKASALLRDSLNLGPHCHSSSLDKVIQLLLCDLLLV
MRTNVWRLQQQGAGPAGSGPVGTSGPPGVHQASPPELQGFQQDLSSLRKLAHSFRPAMRR
LFLHEATARLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPXQREQAEAVMLACRYL
PPSFLSAPGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctatcctttgacgatccctcgttggataatctggatcctacactgtcgctc
aatgaccccagcgatattgacacggctctcttaagcgacattgatgatatgttacagctc
atcaacaaccaggacatggagtttggaggactctttgataaccctccatacacagggccc
cctcccacccaagagcttcctggtttgacccagtctatcacctcagctgcccctccagcc
accaccaccacaccctcaccttcatcctcctcttccatcctaagcagtagcccccacctg
gatgcgctcctgggaccccccatcacccgcagctcttccactccagacaaggccttccag
cctcccactttccagcagtcccccttggcccaggtacccagctccaccccacggcagcag
ccagcctccccgcagcaggctcagaccctcagacagcctcaggtggaacagccccaaccc
attctcagcccaactgcaccggcccaggcagcttcaccccatggctcaccgggaccgagc
ccggtgttcagctccacgccacaggctctcttcacctcgcctgcaccccagactccactt
caggcccagccacagacacagacacagacacaacttcaggcccaggctcagccccaacaa
gcccggaccaactacagcaaccagaacaactacacggctggcagccccggcaacgtgagc
caacccgccaccagtttgccatcctcacctccaagtgttcagccagtggccatccagact
cagctccaagggctgaccaccacctcctctctgctggccacgtcagcaagcccacctgtt
caaaccatcgcgccccatgtgcagcaagtacccgtgctgctgcagccccagttcatcaag
gctgagtctctgctgctgaccactctcaagcatgacccctgcatggtcaccactgtggcc
tctcccacatccctggccacaaccaccaccccagtacagagcacttcactgcaggctttc
atgggcggtggcaccatcctgaccacggtgccggtcatggtggacactgagaagctgcct
atcaaccgcattgccatcagcagtaagccggccggccagccccacaagggtgagaaacgc
actgctcacaacgccatcgagaagcgctaccgctcttccatcaatgacaaaatcgtggag
ctcaaagacctggtggctggtactgaggccaagctcaacaagtctgcagtgctgagaaaa
gccattgactacatccgttacctgcagcaggctaatcagaaactcaaacaggagaacatg
gctcttaaaatggcagctcagaaaaacaagtcgctcaaggacctggttgccatggaggta
gatggacagtctgatgtgaagaacgagctgcccacccccccagcttcagatgtgggctcc
ccgacttctttctcacactgtggcagtgactcagagcccgacagcccgatgggggaagac
acaaagccgaatgtgggcatgttggacggatcggcagcaggcggtagtgctggcggcatg
ttagaccgttcccgcatggcgctgtgcgccttcaccttccttttcctctctctcaaccct
ctggcagctctgctgtgttcatctggcagcagctcagctggaagcaccgcagccaccacc
acccatcacgcaggcaggagcgttctgggtgtgcatattgctgcggactcatggggttgg
atggactggatgctaccaactatacttgtatggctactcaatggtattctggtgtctgga
gttctgatccgtctcttggtgtatggagaacctgtaaccagaccacactctggatcctct
gttctgttctggaggcaccgcaagcaggctgacctggacctggctagaggggattttgct
caggctagtcagaacctgtggacctgtcttaaggctctcggtcgtcccttacccacctct
cagttggacctggcttgtgctgctttgtggtctctgctaagattctgcctccagcgcctc
tgggtgggccgctggctggctgccagagctggagggctgcgatccgaccgccccctgcag
gaagatgcctgcaagagcagccgtgatgctgccctagtttaccaccgcctgcaccagctt
catatgacaggtaaattgaatggtagccacctgtccgcagtgcacatggctttaagtgca
gtgaacctggcagagtgttctggctcctgtctgcctgtagccactctggctgaggtctac
gtctctgcagctctacgggtcaaagccagcctgccaaggatcctccatttcacctctcgt
gtgttcctgagcagtgcccggcaggcgtgcctatcctccagtggcagcgtacctccagcc
atgcagtggctctgtcacccactaggtcaccgcttctttgtggatggggattgggctatt
cgcagcactcctaaagaaagcatctacagccaggctggcaatactgtggatcctctggcc
caggtgactcaggcgttcagagagcacctcttggagaaggctctgtactgtgtcgcccag
cctcacggagagaaaagttccagccagggcgagggggagtatgctgatgccctggagtac
ctccagctgctgattagcgcatcagatgcagccggtgccacatcccagtcctttgcgatc
ggctccaacatggccactgtgactggctgtgacccccactccaagtggtggtcctcggtc
gccgtggtgatcatcaactggctccaaggagacgacgctgcggcggagagactgtatccg
actgttgagcacctgccccgcagtttgcagaacgcagagagtcttctgcccaaggcgtgt
ctgaacacattcagggcagtccgggctctgctgtccaagccagaaaactgccagttgagt
ctgagctacagcgacaaggccagcgccctgctccgagacagcctcaacctaggaccacac
tgccacagctccagtttagacaaggtcatccagttgctcttatgtgatctgctcttggta
atgaggaccaacgtgtggcgtctgcagcagcaaggggctggtcctgcagggtctgggccg
gtgggtaccagcggcccgccgggggtccaccaggcctccccgccggagctccaaggcttt
cagcaagatctcagttccctgcgcaaactggcgcacagcttcagacctgcaatgcgaaga
ttgttcctccatgaagctacagccaggctgatggcgggggccagtcccactcgcacgcat
cagctcctggatcgctcgctgcgacgcagagcaacacccggagccaagacagaggagtgt
gagacgcgaccgngccagcgggagcaggcggaggctgtgatgctggcgtgccgctacctt
cctccctcctttctgtcggctcccggccaaagggtgggcatgttggctgatgcggcccgc
accctggagaagctgggagacaagagaaccctgcacgactgccagcaaatgatcatcaag
ctgggcagcggcaccaccgtcaccaacagctag
DBGET
integrated database retrieval system
