Lates calcarifer (barramundi perch): 108894863
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Entry
108894863 CDS
T04895
Name
(RefSeq) dystroglycan
KO
K06265
dystroglycan 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03273
Virion - Lassa virus and SFTS virus
lcf04512
ECM-receptor interaction
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108894863
03268 Virion - Orthopoxvirus
108894863
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108894863
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108894863
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Gene cluster
GFIT
Motif
Pfam:
DAG1
a_DG1_N2
He_PIG
DUF4064
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
108894863
NCBI-ProteinID:
XP_018549000
UniProt:
A0A4W6G0X3
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Position
LG12:1077141..1120008
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AA seq
907 aa
AA seq
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MHHKLSWGSLGASRGLDVRLPRTRALLLGLLLAAAGWLHPPVRAEVEIDVLGEMVLMEAG
GQSEGVGGRSELEASMHSSLLRDFQEVTEGIQEMEAVAVETGETAATQQNAATPTAFPDS
SAVVGRIFQMKVPNKMEDVYLGDIVKITEMGKDSLPAWLHWDASSRILRGLPLEEDKGVH
YISVSISNHTKSSSSEVFSIEVHPEDHSDSDSAQLTSNQASTEDDVQPFMCGNEEPVTVL
TVILDADLTKMSSEQRVELLDSMRSFSGVGLQHMKILPVVNNRLFDMSAFMAGPGNAKKV
VENGALLSWKLGCSLDQSTVPNINSVQGPAKEGTMSAKLGYPVVGWHIANKKPHVPKRVR
RQLNNTPTPVLAVLPPTTVVEPPVRIIPTLSSPSIAAPTESSAPPVRGPVPLPGKPTIRV
RDPIAHTPTLGPPQPTRVMETTSTISIQPTMTRPTYVEATATPSTPTRKPTKKPKRPKTT
PAPREPKTSTAKPSRRTTPSPGVVPDPYNTKPTLRNPIDQVNALVGTYFEVKIPSDTFFD
KEDGTTDKLRLTLRQNHNEVVGDGSWIQFNTTSQLLYGLPDVQHVGKHEYFMQATDKGGL
SAIDAIEVRVNRWPANDKTPVIFTARFEGEPRSVTNDIHKKILLVKKLAYALGDRNSSTV
SLRNITKGSIVVEWTNTSLPQHPCPKEQLTVMSRTLANADGRPSQTFRYSMEPEFRPLDV
MVKGRASCRTYSFIPPGEIDIPEPPAVTPALGTGRQSTDDVYLHTVIPAVVVAAILLIAG
IIAMICYRKKRKGKLTIEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKPPLPP
PEYPNMATPETTPLNQELLGEYTALRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRS
PPPYVPP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcaccataaactaagttggggaagcctcggggcgagcaggggcctcgatgtgagacta
cccaggactagagccctgctgctgggcttgctcctcgccgcggcgggctggctccacccg
ccggtgcgcgcagaggtggagatcgacgtgctgggcgagatggtgttaatggaagcgggc
ggacagagcgagggagtgggcggcaggagcgagctggaggcctccatgcactcctcgctc
ctgcgggacttccaggaggtgactgaaggtatccaggagatggaggctgttgccgtagaa
accggggagacggcagcaactcagcagaacgcggcgacgcccacggccttcccagactcc
tcggcggtggtgggtcgaatcttccagatgaaggtgccaaacaagatggaggatgtttac
ctgggtgatattgtcaagattaccgagatgggtaaggattccctccctgcctggctgcac
tgggacgccagcagcagaatcctgcggggtctgcctttggaggaggacaaaggtgtccat
tacatctccgtatccatctccaaccacacaaagtcctcttcctcagaggtgttttccatc
gaggtgcaccctgaggatcactcggactcagattcggcccagctgacgtccaaccaggcc
tccaccgaagatgatgtccagccgttcatgtgcggaaacgaggagccggtcacagtgctg
acggtgatcctggatgcagatttaaccaagatgagctcagagcagagggtggagctcctg
gatagcatgaggagtttctctggggtggggctccagcacatgaagatactccccgtcgtc
aacaacaggctgtttgacatgtctgcgttcatggctgggccggggaatgctaaaaaggtg
gtggagaacggcgctctgttgtcctggaagctcggctgctcgttggaccagagcacagtc
ccaaatatcaacagtgtccagggtcctgcaaaggagggcacgatgtcagccaagcttggc
taccctgtggtgggatggcacattgccaacaagaaaccccatgtccctaagcgggtgagg
cgccaattaaacaacactccaacacctgttctggcagtgcttcctccaacaactgtggtg
gagcctccagtgaggattatccccaccctgtcctctccctctattgctgcaccaactgaa
agctctgctccccctgtaagaggccccgtcccccttccaggcaagcctacgatcagagtc
cgtgacccaatcgcccacacaccaaccctgggacctcctcaaccaacgagggtgatggag
accaccagtaccatttccatccagccaaccatgacccggcctacttatgtggaagccact
gccacgccatccacacctaccagaaaacctaccaagaaacccaagaggcccaagaccaca
ccagcgcccagagagccaaagacgtccacagcgaagccgtccaggcgcaccaccccatca
cccggtgttgtgccggatccatacaatacaaagcctaccttgcgtaaccctatcgaccag
gttaatgcattggtgggcacctatttcgaggttaagatcccatctgatacattcttcgat
aaagaggacgggacaacagacaagctgcgtctcaccctgagacagaaccacaatgaagtg
gttggagatggctcctggatccagttcaacaccaccagccaactcctctatggcctgcct
gatgtccaacatgtgggaaaacatgaatatttcatgcaggcaactgacaaaggtggcctg
agtgcaattgatgccatcgaggtccgtgtgaaccgctggcccgccaacgacaagacccct
gtgatcttcacggctcggtttgaaggtgagccacgttccgtaaccaatgacatccacaag
aaaatccttctggtcaagaagctggcgtatgccctgggagaccgcaacagcagcacggtg
agtctccggaatatcaccaaagggtcgattgtggtggagtggacgaacaccagcctccca
cagcacccgtgtccaaaggaacagctcacagtcatgagcaggacgctggccaatgctgac
gggaggccgtcacagaccttccgctactccatggagcctgaatttagacctctggatgtc
atggtgaaaggaagggcaagctgcagaacgtattccttcatcccacctggagagatcgac
ataccagaacctccagcagtcactccagccctgggaacaggccggcagagcacagatgac
gtctatctccacacggtcattcctgctgtggtggtcgcggcaatcctgttgatagcaggt
atcattgcaatgatctgctacaggaagaaacgaaagggcaagctgaccatcgaagaccag
gccaccttcatcaaaaaaggtgtgccaattatctttgcagatgaactggatgactctaag
ccgcctccatcttccagtatgcccttgattctccaggaggagaaacccccacttccaccc
cccgagtacccaaacatggccacgccagagaccactcccctcaaccaggaactgctgggg
gagtacacagctctgcgggatgaagaccccaacgcacctccctaccagccaccgcctcct
ttcaccgctcccatggagggcaagggctcccgtcccaagaacatgactccctacagatca
ccacctccctacgtgccgccctaa
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