Lates calcarifer (barramundi perch): 108894874
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Entry
108894874 CDS
T04895
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1 isoform X1
KO
K17477
FERM, RhoGEF and pleckstrin domain-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108894874
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108894874
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
SOS1_NGEF_PH
IQ_SEC7_PH
RHG20_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
108894874
NCBI-ProteinID:
XP_018549012
UniProt:
A0AAJ7VDZ4
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Position
LG7_2:4872786..4924267
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AA seq
1038 aa
AA seq
DB search
MVEPADRPSTAGQRLGAPESFGVSTLEPGLRPPVQPPGRQVSIRVQMLDDTQEVFQISQR
SPGKVLFDLVCVHLNLTEGDYFGLEYQDQRKMTVWLDLLKPTLKQIRRPKNTILRFVVKF
FPPDHTQLMEELTRYLFALQIKRDLACGRLICNDTSAALMVSHIIQSEIGDFDETQSWQH
LLHNKYLPDQDAIRDKITDCHRKHVGQTPAESDYQLLEIARRLEMYGVRLHPAKDREGTK
LSLSVAHTGVLVFQGYTKINAFNWSKIRKLSFKRKRFLIKLRADPAQNAHHDTLEFAMAS
RDCCKVFWKICVEYHAFFRLFEEPKPKPKPILFTRGSSFRFSGRTQKQIIDYVKDSEMKK
VPFERKHSKILSNSSMTPQSSSFRSQVPKESAMSVPLADQPDSARLGHQAESNGSEEPLP
VTASANGFQDTPVAPGSDPIQSRQNHHGTRSAPDQQLLNPGSPASEDSPLGSPHVVVNGN
GSVNGQEMGGTAVLGLGQSPEGRQLSPLTSPLLTEAGYVRNEDEDEARRKKFPTDKAYFI
AKELLTTERTYLKDLQVITESFQSFVGKDEAFPDSVKKLISTNYDPVHKFHQGFLKEVEQ
RLAQWEGRSNAHIKGDYQRIGDVLLKNIQGLRQLTIHLQKHSECLVELERACRSSRKVET
LCRDFEQQRVCYLPFNVFLLRPLHRLLHYKLILERLCKHYPPTHDDFRDCRAALADISEM
VLQLQGTMMKMENFQKLLELKKDLTGLDNLAIPGREFIRLGCLSKLSGKGLQQRMFFLFS
DSLVYTSRGMTPSNQFKVHGQLPLYGMTIRESEEEWGVPYSFTLFGQRHSVVVAASCASE
MERWVEDIRMAIDLAEQSSGLNTDLLSTGLSDNKLLEDSGAEQESEEELCGSRSSLERQG
HRGNTTVHVCWHRNTSVSMVDFSVAVENQLSGNLLRKFKNSNGWQKLWVVFTNFSLFFYK
SHQDDYPLASLPLLGYSVTVPSESENIHKDYVFKLHFKSHVYYFRSESEYTFERWMEVIR
SATCSSSHSLPSTRKDLY
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggtagagccagccgacaggccgtctacagccggacagaggctgggcgcccctgaaagt
ttcggggtgtccaccctggagccgggcctgcgtcctcctgttcagcctccggggaggcag
gtctccatacgggtgcagatgctcgatgacacacaggaagtcttccagatatcgcaacgt
tcccctggcaaagttttgtttgacctggtctgtgtccatctcaacctgaccgagggagac
tattttggattggagtaccaggaccagcgcaagatgacggtgtggctggatctgctgaag
ccgacactgaaacagatcagacggcctaaaaacaccatccttcgttttgtggtgaagttt
ttccctcctgaccacacacagctcatggaggagctgactcggtatctgtttgccttgcag
ataaaacgcgacctcgcctgcggtcgtctcatctgtaacgacaccagcgctgctctcatg
gtctcccacatcattcagtcggagataggagactttgacgagacccagagctggcagcac
ctcctccacaataagtacctgcccgaccaggacgccatcagagacaagatcacagactgc
caccgcaagcatgtcgggcagactccggcagagtcggactaccagctgctggaaatcgct
cggcggctggagatgtacggtgttcgtctgcacccagccaaggacagagagggaactaag
ctcagcctgtccgtggcgcacaccggggtcctggtcttccaggggtacacaaagattaac
gccttcaactggtccaaaattcgcaagctcagcttcaaacgcaaaaggttcctgatcaag
ctgagagcagatcccgcacagaacgcccaccacgacacgctggagttcgccatggccagc
agggattgctgtaaggtcttttggaagatctgcgttgagtatcacgccttcttcaggctc
tttgaggagcccaagcccaaacccaagcccatcctcttcaccagaggatcctcattccga
ttcagtggccgaactcagaagcagatcattgattatgtgaaagactcagagatgaagaaa
gttccatttgaaaggaagcacagtaagattctgtccaacagcagcatgacccctcagtcg
tcttccttcagatcacaagtgccaaaagagagtgccatgtcggtcccgttagcagaccag
cctgactctgccagattgggccatcaagctgaatctaatggttcagaggagccactgccg
gtcacagcctctgccaacggtttccaagatacccccgtggcgcccggctcagacccgatt
cagtccaggcagaaccaccacggcaccagatcagcgccggaccagcagctcctcaaccca
ggaagtcccgcttcagaagactccccgctgggaagtccccatgtggtagttaacgggaac
ggctcggtaaatggacaggagatgggcggcaccgccgtcctgggtctaggccagagtccc
gagggacggcagctatcgccgctcaccagcccgctgctcactgaagcaggatacgtccgc
aacgaggatgaggacgaggcgaggaggaagaagtttcccacagacaaggcctacttcata
gccaaggagctgttgaccacagagcggacctacctcaaagacctgcaggtcatcacagag
tccttccagagttttgtggggaaagacgaagcgtttcctgactctgttaagaaactgatc
tccaccaactacgatccagtccacaagtttcaccagggattcctgaaagaggtggagcag
cggctggcacagtgggagggtcggtccaacgcccacattaaaggagactatcagcgaatt
ggtgatgttttactgaagaacattcagggtctgaggcagttgacgattcatctccagaaa
cattcagagtgcctggttgaactggaacgggcctgcaggtccagtcggaaggtggagact
ctgtgtcgagactttgagcagcagagggtttgctacctgcccttcaacgtcttcctgctg
cgacctctccaccgcctgctgcactacaaactcatcctggagaggctctgcaaacattac
ccacccacccacgacgacttcagggactgtagagcggccctggcggacatctcagagatg
gtgctgcagcttcaaggcaccatgatgaagatggagaacttccagaagcttctagagctg
aagaaagacctgaccggcctcgacaacctcgctatccccgggagggagtttatcaggctc
ggctgcctcagcaagctctcagggaagggcctccagcagagaatgttcttcctgttcagt
gattccttggtgtacaccagtcgagggatgaccccgtccaaccagtttaaagttcatgga
cagctgcctctctatggcatgacgatcagagaaagtgaggaggagtggggagtcccttat
tccttcaccttgtttggacagcgtcattctgtggtggtggcagccagctgtgcgtcagag
atggagcggtgggtggaggacatcaggatggcgattgacctggcagaacagagcagcggc
ctgaacactgacctgctctccaccggcctctctgacaacaagctgctggaggacagcgga
gccgagcaggagtctgaggaggagctctgcggctcgcgctcgtctctggagcgccagggt
caccgcggcaacaccaccgtgcacgtctgctggcatcgcaacaccagcgtgtccatggtg
gacttcagtgtcgctgtggagaaccagctgtcggggaacctgctgaggaagtttaagaac
agtaacggctggcagaaactctgggtggtcttcaccaacttcagcctcttcttctacaag
tcacatcaggatgactaccctctggccagccttcctctgctgggctactccgtcaccgtc
ccgtctgagtcggagaacatacacaaagattatgtcttcaaacttcactttaagtcccat
gtctactacttcagatcagagagcgagtacacctttgaaaggtggatggaggtgatccgc
agcgccacctgctcctccagccactccctgccgagcaccaggaaagacctttattga
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