Lates calcarifer (barramundi perch): 108894876
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Entry
108894876 CDS
T04895
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00230
Purine metabolism
lcf00670
One carbon pool by folate
lcf01100
Metabolic pathways
Module
lcf_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
108894876
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108894876
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
108894876
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
108894876
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
108894876
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
RimK
ATP-grasp_4
ATP-grasp_2
Dala_Dala_lig_C
Motif
Other DBs
NCBI-GeneID:
108894876
NCBI-ProteinID:
XP_018549014
UniProt:
A0A4W6DIG1
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Position
LG7_2:5397026..5407673
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AA seq
1020 aa
AA seq
DB search
MAERVLVVGSGGREHALAWKLAQSPQIQQVLVAPGNAGTASCGKISNSEVSVNNHSILAQ
FCKDHHVGLVVVGPEVPLAAGIVDDLMAAGVPCFGPSAKAAQLEASKSFSKAFMERHGIP
TARYGSFTDPQEACNYIRTADFPALVVKASGLAAGKGVIVAKDQDEACQAVMDIMKDRAF
GAAGETVVVEELLEGEEVSCLCFSDGSSVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQIRETVLQKTVDGMKEEGTPYVGVLYAGLMLTKQGPKVLEFNCRFGDPECQV
LLPLLKSDLYEVILNTMNGKLASSAPMWHQDSSAVTVVMASAGYPGSYKKGVEITGLSQV
QDKGLQVFHAGTALKEGGGGVVSSGGRVLTVTAISSSLEAALQAANQGVAAIGFPGAEYR
RDIGHRAIAHLNQRRGLTYKDSGVDIAAGNKLVEMIKPLAKATSRTGCNAELGGFAGLFD
LKAAGFVDPILVSGTDGVGTKLKIAQECRQHGSLGQDLVAMCVNDVLAQGAEPLFFLDYF
SCGSLDVDVAASVVGGVAKACEMAGCALLGGETAEMPGVYAPGEYDLAGFCVGAVERGAL
LPRLGDIAEGDLLIGLASSGVHSNGFSLVRKVLEKAHLNYSSPAPFGKPEQTVGEALLTP
TKIYSRLLLPILRSGAVKAYAHITGGGLLENIPRVLPQELAVDLDASRWSIPPVFSWLHK
EGGLSEEEMARTFNCGLGAVLVVAPLDAQRVLRQLQAHEEAWIVGSLAHKQPGAEPVVVR
NLKHSLLNAGPAFGGELVVEQKNGCHGDISTPRKRTRVAVLISGTGTNLQALIEQAKRPS
SSAEIVVVISNRPGVQGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDRVLEELGVELVCL
AGFMRILTGAFVKKWNGKLLNIHPSLLPSFKGVNAQKQALQAGVRVTGCSVHFVAEEVDA
GAIIVQEAVPVLSSDTEESLSDRIREAEHRAFPTALELVASGAVRLGEDGHIMWKSNSQS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgggtgttggtggttggcagtggtggacgggagcatgcactggcctggaag
ttggcccagtcgccgcagattcagcaagtcctggtggctccgggtaacgcaggcacagcc
agctgtgggaagatcagcaactctgaggtgtcagtgaataatcactccatcctggctcag
ttctgtaaggatcatcatgtggggctagttgtagtggggcctgaggttccgctggcagca
ggtatcgtggacgacctgatggcggcaggagtgccgtgtttcggcccctcggccaaagca
gctcagttagaggccagcaagagcttctccaaggctttcatggagcgtcatggcattccc
acggctcgctacggctccttcactgacccccaggaggcctgcaactacatccgcactgct
gactttcccgcactggtggtgaaggccagcggtctggcagcgggaaagggagtcattgtg
gcaaaagaccaggacgaagcctgtcaggctgtgatggacatcatgaaggacagagcattt
ggagctgcaggggagacagtggtggttgaggagcttctagagggagaggaagtgtcttgt
ctgtgcttcagtgacggctcctcagtgtccccgatgcctccagcgcaggatcacaagcgg
ctgcaggacggcgacctggggccaaacaccggcggcatgggcgcctactgccccacccct
caggtgagtcaggagctgctgcagcagatcagagagacggtccttcagaagacagtggat
gggatgaaggaggagggaactccttatgtaggtgtgctgtacgcagggctgatgttgacc
aagcaggggccaaaggtgctcgagttcaactgtcgcttcggagaccctgagtgtcaggtg
ctgctgcccctgctgaagagcgacctgtatgaagtcatcttgaacaccatgaatggcaaa
ctggcctccagcgcccccatgtggcaccaggacagctctgcagtcacagtggtcatggcc
agcgctggttaccctggctcctacaagaaaggagtagagatcacaggtttgtcccaggtt
caggacaaaggtctgcaggttttccacgccggcacagccctgaaggaaggaggtgggggt
gtggtgtccagcggcgggcgggtcctgactgtcaccgccatcagttcgtccctagaggcg
gccttgcaggcggccaatcagggcgtggctgccatcggcttcccgggtgccgagtatcgc
cgcgatatcggccaccgggccatcgcccacctgaaccagcgcagaggtctgacctataag
gacagcggagtggacatagctgctggtaacaagctggtggagatgatcaagcctctggcc
aaggcaacttctcgcactgggtgtaatgcagaactggggggctttgctggtctctttgac
ctgaaggcagcaggatttgtcgacccgatcctggtatctgggacagatggcgtgggaacc
aagctcaagatcgcccaggagtgcaggcagcatggcagcctgggccaggacctggtggcc
atgtgtgtgaacgatgtgctggctcagggcgctgagccgctcttctttctcgactacttc
tcctgtggcagcctggatgtggacgtggctgcctcggtggttggtggcgttgctaaggcc
tgtgagatggctggctgcgctctgctgggaggcgagacagcagagatgccgggcgtttat
gctccaggtgagtacgacctggctgggttctgtgttggagcggtggagcgcggggccctg
ctgcccaggctgggggacatcgctgagggggacctgctgattggactggcttcctctgga
gtccacagcaacggcttcagcttggtccgcaaagtcctggagaaggcccatctcaactac
agttcccctgctccttttggcaagccagaacagactgtcggggaggctttgctcacacca
actaagatctacagccgtctcctcctgccaatcctgcgcagtggcgccgtcaaagcctac
gctcacatcacaggtggcggacttctggagaacatccctcgggtgctgccccaggagctg
gcagtcgatttagacgcatcacgatggagcatccctccggtgttttcctggctgcacaag
gaggggggtctgagcgaggaggagatggcccgcaccttcaactgtggcctgggtgcagta
ctggtggtggctcccctggatgctcaaagggttctgcgccagctccaggcccacgaagag
gcctggatcgtgggttcacttgcccacaagcagcctggggcagagcctgtggtggtccgt
aacctgaaacacagcctgctgaatgcaggaccagccttcggtggagagttggtggttgag
caaaaaaatggttgccatggcgacatcagcacgccacgcaagaggacaagagtagctgtt
ctcatctctggcacaggcaccaaccttcaggcgctgatagagcaggcgaagcgtccgtcc
agctcagcagagattgtggtggtcatctccaacaggcctggagttcagggcctgaagaga
gcgtctttggctggcatccagacacgggtggtggaccacaaactgtatgggagccgtgca
gagtttgatgggaccattgatcgagtgctggaagagcttggagtggagctggtgtgtctg
gctggattcatgaggatcctcacgggagcttttgtcaagaaatggaacggaaagctactg
aacatccatccatccctgctgccatcattcaagggtgtgaatgcccagaagcaggccctg
caggccggcgtgcgggtcacaggctgctcggttcactttgtagcagaagaggtggatgca
ggagccatcattgtgcaggaggcagtgcccgtgctgagcagtgacacagaggagagtctg
tctgacagaatcagagaggccgagcaccgagccttccccacggctttggagctggttgcc
agcggtgccgtcaggctcggagaagacgggcacatcatgtggaagtcaaattctcagagt
taa
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