Lates calcarifer (barramundi perch): 108894877
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Entry
108894877 CDS
T04895
Name
(RefSeq) neural cell adhesion molecule 2 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108894877
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108894877
04517 IgSF CAM signaling
108894877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894877
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108894877
04090 CD molecules [BR:
lcf04090
]
108894877
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108894877
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108894877
04091 Lectins [BR:
lcf04091
]
108894877
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
108894877
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
NCAM1/2
108894877
CD molecules [BR:
lcf04090
]
Proteins
108894877
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
108894877
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Others
108894877
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108894877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_C17orf99
Pur_ac_phosph_N
Ig_6
Ig_PDGFR_d4
Ig_VEGFR-1-like_5th
C2-set
C2-set_3
Herpes_gE_N
Ig_Rha78A_N
Tissue_fac
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
108894877
NCBI-ProteinID:
XP_018549019
UniProt:
A0A4W6DHW2
LinkDB
All DBs
Position
LG7_2:5085657..5332708
Genome browser
AA seq
870 aa
AA seq
DB search
MLGGVLSAEHARWTSGERERAYRKEGKEGAEADQSPAEPKTADERSRACVSPLSIFTAAE
SSVRQRETCPKMMLKLVHFLGVLVCGSQAALQVSISLNKVELSVGESKFFICTAIGEPVR
LEWYNPQGERIVPSKRMALHTESSRSRLIIYNAIIEDAGIYRCQATDGSGHTEEASVVLE
IYQRLTFQDVESPQEFRYGETAEVVCDVISSPVPVVVWYYQDKEITEEHHSKFQVLANNN
LQIHQVTKADEGVYRCEASVEARGEIDFVDIAVVVNVPPVLSVSQQSFNATADYQESVTF
TCITSGSPDPVVTWHRKGQQLEPSEQYIFNRLEGGRSMLTIRNIRQGDGGTYSCKASNKA
GSQEGELFLKVFVQPHITLLKNVTAVEGSAAMISCVAEGEPLPDISWRRAKDGQPFVDGD
KSQDGRFEVRGRHGKSVLTISGVRLTDLGRFDCEALSRIGGHQKSMFLDIEYIPKFLTNH
TIYYSWEGNPVNISCDVMSNPPATMLWRRERFTISAEGTANTRVHSTEGKSVLEVTPMSD
RDFGRYNCTARNNIGVRYQEFILAQADVPSNPYSVRLSAVSQRLATVTFMKPDSHGGVPI
SYYLVQYKEVGSQDWRDVKSHSVQTTVVLTGLEPNTTYEVRVAAVNGKGQGEFSHTETFQ
TLPIREPSPPAVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVPGVN
DFAMLQPLQWNTRYEVEITARNVKGLSEPTFYQFFMPQKPDITAESLFSGLGLGAVVGLG
LGALLLLLVLVDVSCFFLRHCGLLMCITRTLCSKKTATSGKGKEIEEGKAAYLKLPLKEE
NGKESLKPDTIEIKVHSDNSIHTKPDDSKA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggggggtcctcagcgcagagcacgcacggtggacgagcggcgagcgggagcgc
gcgtataggaaggaagggaaggaaggagctgaggcagatcagtcgccagcggagcccaag
acggcggatgaacggagtcgagcgtgtgtgtcgcccttgtcgatttttacagcagctgaa
agcagcgtccggcagcgcgaaacctgcccgaaaatgatgctcaaactcgtccatttcctc
ggggtcctcgtctgcggcagccaagccgccctgcaggtgtccatatctttgaacaaagtg
gagttaagtgttggagagtccaaattcttcatctgcacagctattggcgagccggtgagg
ctggagtggtacaacccacagggcgagcgcatcgtgccctccaagcggatggcactccac
acggaatcatcacgatccaggctcatcatttacaatgcaatcatcgaggacgcgggtatc
taccgctgccaggccacagacggcagcggtcataccgaggaggcctcggtcgtgctggag
atctaccagaggctgacttttcaggatgttgagtcaccacaggagttccgctatggcgag
acagcagaggtggtgtgtgatgtcattagttcacctgtgcccgtggtggtgtggtactac
caggataaggaaatcactgaggagcaccatagcaagttccaggtgctggcaaacaacaac
ctgcagatccatcaggtgaccaaggctgacgagggcgtgtaccgctgcgaggcgagcgta
gaggcccgcggtgagatcgattttgtggacatcgctgtggtggtcaatgtgcctccggtg
ttgtcagtgtcccagcagtccttcaatgccacagctgactaccaggaatcagtcaccttt
acttgcatcacctctggatctcctgaccctgtggtcacatggcacaggaaagggcagcag
ctggagccatcagagcagtacattttcaacaggctggaaggtgggcgcagcatgttaacc
atccgcaacatccgacagggcgatggagggacctactcctgcaaggcctcaaacaaggca
ggatctcaggaaggagagctcttcctcaaagtgtttgtccagccccatatcaccctgctg
aaaaacgtgacagccgtggagggcagcgccgccatgatctcctgcgtggctgagggcgag
cctctgcccgacatttcctggaggagagccaaagacggccagcccttcgtggacggagac
aagagccaggacggacgttttgaagtccgcggtcgtcacggcaagtcggtgctgacaatc
agcggcgtgaggctcaccgacttgggtcgctttgactgtgaggcgctcagcaggatcgga
ggtcatcagaagagcatgtttctggacattgagtacataccaaagttcctgaccaatcac
accatctattattcatgggaggggaacccagtgaacataagctgtgatgtgatgtccaac
cctcccgccacaatgctgtggaggagagagcgcttcaccatctctgcagagggaactgcc
aacacgagggtacacagcacagagggcaagtctgtgctggaggtgactcctatgtctgac
agggacttcggccgttacaactgcacagccaggaacaacattggcgttcgataccaggag
ttcattctggcccaggcagatgtaccatcgaatccatactcagtgcgtctgtcagctgtc
tcccagcgcttggcgaccgtcaccttcatgaaaccggactcacatggcggcgtgcccatc
agctactacctggtccagtacaaggaggtgggctcacaggactggagggacgtcaagtca
cacagtgtccagacgacagtggtgctgacaggactggagcccaacacgacgtatgaggtt
cgagtggcagctgtcaatggaaaaggtcagggggagttcagccacacggagaccttccag
actttacccatccgagagccgagtccgccggcggtccacgggcagagaggaatgggcaag
gcctacaggctggggctggtcaagcaggatgatggagggatgcccattgtggagtatata
gtcaagtacaagactgacaaagaggaacagtggatgaccaagctggttccaggagtgaat
gattttgcaatgcttcagccgctgcagtggaacacaagatatgaagtggaaatcacagcg
cgcaatgttaagggcctgtcggagccgaccttctatcagttcttcatgccacagaaacct
gacattacagcagaatccctgttcagcggcctggggctgggggcggtggtgggcctcggc
ctgggagcgctgctgctgctcctcgtgctggtggacgtcagctgcttcttcctgcgtcat
tgcggcctgctgatgtgcatcacacgcacgctgtgcagcaagaaaacggccaccagcggc
aagggcaaagaaatagaggagggcaaagccgcctacctgaaactaccgctgaaggaagaa
aatggaaaagagtctctcaagccggatacgattgaaatcaaagtgcacagtgacaacagc
atccacacaaagcctgacgacagcaaagcgtaa
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