Lates calcarifer (barramundi perch): 108894922
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Entry
108894922 CDS
T04895
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108894922
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108894922
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108894922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108894922
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
108894922
Peptidases and inhibitors [BR:
lcf01002
]
Threonine peptidases
Family T1: proteasome family
108894922
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
108894922
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108894922
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
108894922
NCBI-ProteinID:
XP_018549076
UniProt:
A0A4W6C4B1
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All DBs
Position
LG10:complement(4323826..4327955)
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AA seq
262 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPTSRLVSLVGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERCMDKFS
DCNLNELVQHGLRALRETLPTEQDLTTKNVSIGIVGKEMEFTIYDDDDVAPFLEGLEERP
QRKVAQPADEPAGEAPDEPMEH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaccagtacgacaacgatgtaacagtatggagcccgcagggccgcattcat
cagatcgagtatgccatggaggcagtgaagcaaggctctgcaactgtaggactcaaatcc
agaacccatgcagtcctggttgcactaaagagagcccagtctgaactggctgcccaccag
aagaagatcctccatgtcgacaaccatattggtatttccatcgctggactgactgctgac
gccagactgctctgtaacttcatgcgtcaggagtgcctggactccagatttgtcttcgac
aggcccctccctacatcacgcctcgtctctcttgttggcagcaaaacccaaatcccaaca
cagaggtatggaaggaggccctatggcgttggactcctcattgctggctatgatgacatg
ggacctcacatcttccagacctgcccatcagccaactactttgactgcaaagccatgtcg
atcggagctcgctctcagtcggctcgtacctacctggagagatgcatggacaagttttct
gactgtaatctgaatgagctggtccagcatggcctccgtgctctcagagaaaccctcccc
actgagcaggacctcactaccaagaatgtttccatcggcattgtggggaaggaaatggag
ttcaccatttatgatgatgatgatgtcgccccgttcctggagggactggaggagaggcca
cagagaaaggttgcccagcccgcagacgagcccgctggagaggcacctgatgagccaatg
gagcactga
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