Lates calcarifer (barramundi perch): 108894989
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Entry
108894989 CDS
T04895
Symbol
mrc1a
Name
(RefSeq) LOW QUALITY PROTEIN: macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108894989 (mrc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108894989 (mrc1a)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108894989 (mrc1a)
04090 CD molecules [BR:
lcf04090
]
108894989 (mrc1a)
04091 Lectins [BR:
lcf04091
]
108894989 (mrc1a)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108894989 (mrc1a)
Pattern recognition receptors [BR:
lcf04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108894989 (mrc1a)
CD molecules [BR:
lcf04090
]
Proteins
108894989 (mrc1a)
Lectins [BR:
lcf04091
]
C-Type lectins
Others
108894989 (mrc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
Xlink
Chordopox_A33R
Ricin_B_lectin
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
108894989
NCBI-ProteinID:
XP_018549156
UniProt:
A0AAJ7Q827
LinkDB
All DBs
Position
LG24:complement(14194392..14204977)
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AA seq
1437 aa
AA seq
DB search
MLPCSNLAVILCLLQVLCITADIDSGSFLIFNENHNKCVKVESATSITVAPCDPHAKQQQ
FRWASESRLLSLSLKLCLGATEVKDWVKVLLFECDESSILQHWQCKNETLFGLKDQDLHL
NWGNRNERNLMIYKGSGLWSRWRIFGTLGDLCSKGYQEIFTIGGNAFGGPCQFPFKFGEK
WYAECTKDGRSDGQLWCATERDYGESKKWGFCPTQASSGWDTDPVTGVQYQRNVQSVLTW
HQARKSCQQQGADLLSIVELHEQSYISGLTNILGTSLWIGLNSLDFESGWQWSNGNPFRY
LNWAPGHPSSEPGLTCATLNAAKASKWESSACTKKLGYICRKGNSTSLPPPSSKDQPSFC
PXHWVPYAGNCYYLERNKKMWRDALAACHKEGGDLASIHNIEEQSFIISQSGYLPTDVLW
IGLNDQRNQMLFEWSDHSHVTFTQWQTDEPSHATNLQEDCVLIRGKDGKWADHMCEKTYG
YICKKKASIKPAEGTQEEVNPGCKLGSVRFGSHCYNIGAETKTFDKAKQACSEAGAHLVD
VADRYENAFLVSLVGLRPEKYFWTGLSNTEDRNTFQWTTKRKVSFTHFNVGMPDRKQGCV
AMTTGIFAGLWDVVSCSNKEKYICKKTAEGVQMTTVPPTTPALSCASGWTPAAKRNVCYK
VYQKTKDLKKTWHEAQDFCKAIGGDLMSIHSMKDLSNAPFHASEATWIGFSSLGTSTGFV
WSDGSATSFENWGFGEPNNHNDNEHCAEVQFYYGRHWNDRHCEAYNDWICQIRKGVTPKP
EPVVVATVYNTTEDGWLIYNDTQYYINNDNLPMEAARAYCKKNFGELAVITAESERKFLW
KQIAKGSEGQYYIGMVVNLDKSFSWLDGTPVSYTAWEHNEPNFANNDENCVTIYKNMGYW
NDINCGMELPSICKRSTNFVNTTMAPTTVPKGGCAPEWLSFQGKCYKIVVGNDNKNWQDA
RTYCINQGGNLVSIVTEREQAFLTTQMLRYNEDFWIGMNDVNWEMHFVWTDGKGISYTNW
AKGHPTSVPDGRYSFMDEMFDCVIMVGSITKLTGLWKVEDCHAKKGFICKRNIDSQIVVP
PTTVLPKAFYKLGNDSYKLVAQKMRWDEARRQCQADDADLASILNPITQAYIALQISKYN
EPVWIGLNSNLTGGRYKWVDNWLLSFTEWGTDEPKNNYGCVYIDVDKTWKTAPCTNTYYS
LCKRSPVIAPTEPPQLPGNCPEPKKRKTWIPFRGHCYSFLSSVVDNWAHASVECLKMGAS
LVSIQDPQEGLFIQQNLELLQDGAKTFWIGLYKTHEGEWMWIDNSVVDYTNWKTGMPKSE
SCVDINSDSGQWSTNSCSRYRSYICKTPKVIAPTEKPPSVAHVVEEASHGSAGITVAIVL
VVIAIVGLGAFLLFRKRIPTPVLGECTFDNRLYFNNPIRAPVDTKGLVANIEQNEQA
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctgttcaaatttagctgtgatcctctgtctcctgcaagtcctctgcattact
gctgatatagacagcggctccttcctgatcttcaatgagaaccacaacaagtgtgtcaag
gtggagagtgccacctcaataaccgtggccccttgtgatcctcatgccaaacagcagcag
tttcgttgggcttccgagtcgcgcctcctcagcctttccctcaagctttgtctgggggcc
accgaggtaaaagactgggtgaaggtgctcctcttcgaatgtgatgagagcagcatcctc
cagcactggcagtgcaagaatgagactctctttggcctaaaagaccaggacctgcactta
aactggggcaaccgcaatgagaggaacctaatgatctacaaaggctcagggctctggagt
cgctggaggatatttggcactctgggtgacctttgttcaaaggggtatcaagagattttc
acaatagggggcaatgcatttggaggcccctgtcagttcccttttaagtttggggagaag
tggtacgccgaatgcacaaaggacggtcgatcagacggacagctgtggtgtgccacggag
agagattacggtgaaagcaagaagtggggcttctgtcccacccaagcatcctcaggttgg
gacactgacccagtcacaggcgttcaatatcagaggaacgtacagtcagtgttgacctgg
catcaggccagaaagagctgccagcagcagggagctgacctcctcagcattgtagagcta
catgagcagtcatatatttcagggttgacaaatattttgggaacatctctgtggattgga
ctgaacagcttggattttgaaagtggatggcagtggagcaatggaaacccatttagatat
ttaaactgggctccaggtcatccatcatcagagcctgggcttacctgtgcaaccctaaat
gctgcaaaagcctcaaaatgggagagcagcgcttgcaccaaaaaacttggttacatttgt
cgcaaagggaactctaccagtctgcccccaccatcaagcaaagaccagcccagtttctgt
ccangtcactgggttccttatgcaggtaactgttactacctggagaggaataaaaagatg
tggagggatgctttggcagcgtgccacaaagagggaggagatctggccagcatacacaat
atagaggagcagagcttcatcatatctcaatctggatatttgccgacagatgtgctctgg
atcggtctcaacgatcagaggaatcagatgctatttgaatggtctgatcactcccatgtt
accttcacccagtggcaaactgatgagccgtctcatgccaccaacctccaagaagactgt
gtcctcatcagaggaaaggatgggaagtgggccgatcacatgtgtgagaagacgtacggg
tatatctgtaagaagaaggcctccattaaaccagctgaaggcacccaagaggaagttaac
cctggatgcaaactaggctcagtcaggtttggttcacactgttacaacatcggagctgag
acaaaaacgtttgataaggcaaagcaggcatgctcagaggcgggtgctcacctggtggac
gtggctgacagatatgagaatgctttcttggttagtttggtgggtttaagaccagagaag
tatttctggactggactgtccaacacagaggacagaaacactttccagtggaccaccaaa
agaaaggtctccttcactcatttcaatgtgggaatgccagacagaaaacaaggatgtgtt
gccatgacgacggggatttttgccggattatgggatgttgtcagctgcagcaacaaggag
aaatatatctgcaagaaaacagcggagggtgttcagatgacgacagttccacccaccacc
ccggccctgagctgtgcatctgggtggacccctgctgccaaaagaaacgtctgctacaaa
gtttaccaaaaaacaaaggaccttaagaagacttggcatgaagcacaggacttttgtaag
gccattggtggggacctgatgagcatccacagtatgaaggacctaagcaatgctccgttt
catgcctctgaagcaacttggattggcttcagctccctgggtaccagcacaggttttgtg
tggtctgatgggtctgctaccagctttgagaactggggctttggggaaccaaacaaccac
aatgacaacgaacactgtgcagaagtccagttttactatggacggcactggaacgatcgc
cactgtgaggcttacaatgactggatctgccaaatacgcaaaggtgtgactcccaaacct
gagcctgtcgtagtagcaacagtatacaacaccacagaggatggctggctcatatacaat
gacacacagtattacatcaacaatgataacctccctatggaagctgccagagcttactgc
aagaaaaactttggtgaacttgccgtcatcacagcagagagtgagaggaagttcctctgg
aaacagatagcgaaaggcagtgaaggacagtactacattggcatggtagtgaatttggat
aagtcatttagctggctggatggcacccctgtgagttacactgcatgggagcacaatgaa
cccaactttgctaacaatgatgaaaactgtgtgaccatatacaagaacatgggatactgg
aatgatattaactgcggtatggagctcccctctatttgcaaaagaagcactaattttgtc
aatacaacaatggcccccaccactgttcctaagggaggatgtgcaccagagtggttatct
ttccaaggaaagtgctacaaaattgttgtggggaatgacaataagaactggcaggacgcc
aggacgtactgcataaaccagggaggaaatctggtttccatcgtcacagagagagaacaa
gctttcctaacaacacagatgctgagatacaatgaggatttttggattggtatgaatgat
gtcaactgggagatgcactttgtgtggacagatggcaaaggcatttcatacacgaactgg
gccaaagggcacccaacatcagtgcctgatggacgttattcatttatggatgagatgttt
gactgcgtgattatggtgggcagcatcactaaactgacaggactctggaaagtggaagac
tgtcacgctaaaaaaggcttcatctgtaaaagaaacatcgactctcagattgtagtccca
cccaccactgtgttaccaaaggctttctacaagctcggtaatgattcctacaaactggtg
gcacagaagatgaggtgggatgaggcgaggaggcagtgtcaagcagatgatgcagatctg
gccagtatcctgaaccccataacccaggcatacatcgccttgcagatctccaagtacaat
gagcctgtgtggattggcctcaacagcaatctgactggcggtcgctacaagtgggtcgat
aactggctactgtctttcaccgaatggggcacagatgagcctaaaaacaactatggctgc
gtgtatatagatgtggacaaaacatggaagactgcaccatgtactaacacctactattcc
ctttgcaagaggtcaccagtcatagctcccactgagcctccgcagcttcctggcaactgt
ccagaaccaaagaagcgaaaaacctggatacctttcagaggccattgctattccttcctc
agctcagttgtggacaactgggcccatgcctcggtggagtgcctgaaaatgggtgcatct
ctggtgagtattcaggaccctcaggagggtctgttcatacagcagaacctggagcttctg
caggatggtgccaaaaccttctggatcggcctgtacaagacccatgagggtgagtggatg
tggatcgataacagtgttgtggactataccaactggaaaacggggatgcccaagtcagaa
tcatgtgtggacatcaattctgacagtggacagtggagtacaaacagctgcagcagatat
agatcttacatctgcaaaacacccaaagtgattgcacctacagaaaagcctccatctgtt
gcccacgttgttgaggaagcttcacatggatccgctggcatcactgtggctatagtacta
gttgtaattgccatagttggacttggtgccttcctcctcttccgtaaacggatacccacc
cctgtcttgggagaatgcacgtttgacaacaggttatatttcaacaatccgatccgagcc
cctgtagacaccaagggtctggtggccaacatagagcaaaatgaacaagcatag
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integrated database retrieval system
