Lates calcarifer (barramundi perch): 108895008
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Entry
108895008 CDS
T04895
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108895008 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
108895008 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895008 (chmp5b)
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108895008 (chmp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
Prefoldin_2
DUF948
WEMBL
Histone_HNS_N
FliJ
DUF6414
BORCS8
DUF848
Motif
Other DBs
NCBI-GeneID:
108895008
NCBI-ProteinID:
XP_018549177
UniProt:
A0A4W6CLJ5
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Position
LG24:complement(14446098..14449095)
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AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKAPPANLTDCIGNVDSRAESIDKKIARLDAELVKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDNLMQQSFNMEQANYTIQTLKDTKTTVDAMKGGLKDMKKAY
KHVKIDQIEDIQDQLEDMMEDANDIQEALGRSYGTPDIDEDDLEAELDALGDELLMDDDS
SYLDDAATAPSIPEGLPGDKSTNRDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtatatttggcagaggaaaacccaaggctccaccagcgaaccttacggactgc
ataggaaacgttgattctcgggcagagtccattgacaagaagatcgccagactagatgct
gaacttgtcaagtacaaggatcagatgaaaaagatgagagatgggccttcgaagaacatg
gttaaacaaaaggctatgagagtactgaagcagaagagaatgtatgagggacagagagat
aacctcatgcagcagtcgtttaacatggaacaagcaaactacacaatccagacccttaaa
gacactaaaaccactgttgatgccatgaaaggcggcctcaaagacatgaagaaggcatac
aagcatgtgaaaattgatcagattgaggatattcaagatcagctggaggacatgatggag
gatgccaatgacatccaggaggcgctgggcagaagctacggcacgcctgacatcgatgag
gacgacttggaagcagagctggatgctttgggagacgaactcctgatggacgacgacagc
tcctacctggacgatgctgcgacagctccttccattccagagggtctgcccggtgacaag
tcgaccaacagggatggtgtactggtggacgaatttggccttcctcagattcctgctaca
taa
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