Lates calcarifer (barramundi perch): 108895025
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Entry
108895025 CDS
T04895
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcf01100
Metabolic pathways
Module
lcf_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108895025
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108895025
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
108895025
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108895025
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
HH_YknX
DUF2740
Motif
Other DBs
NCBI-GeneID:
108895025
NCBI-ProteinID:
XP_018549198
UniProt:
A0A4W6D136
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Position
LG24:complement(14949527..14954408)
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AA seq
762 aa
AA seq
DB search
MRLSSFLALFRPALPLILGLSLGCSLSLLMVSWTQGDTDDSCRDELGNGRLFLGRGDNQR
VSRDGDEDFTPHIVPYHKDPNKPHKKVLRTRYIHTELGIRERLLVGVLTSRATLNTLAVA
VNRTIAHHFHRTFFFTGLRSPKVPHGMTVVAHGDDRPVWLMYETVRHLHQHYGSDYDWFL
LAQDDTYMQADRLSELVGHLSAGQDLYMGRAEEFIGGEEKARYCHGGYGYLLSRSLLARL
QPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELGKNADPEREDSTQF
KNAFTVHPVSEPNLMYRLHKRFSQIELEWTYLQIQQLQMQISNLSDLTPEGKAGVTWPIG
INPPFKPRTRFEVINWEYFTEEHIYSCVDSSPKCEMRGADRADVNAVLEIAVERLNERYQ
PQLRFRKRRLLNGYRRFDPTRGMEYMLDLALEAYTQKGHSQVIVKRVNLLRPLSAVEIIP
MPYVTEATRVQVILPVTAQDQDYVSNFLDMYVMNTLDTHDNVLLTFLFIYDPFDAQRVSQ
TDVFAGIKAMIGEVEKRYGDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLSSVWTE
VNADFLNRCRMNAISNWQVFFPIHFQEYSPAVVYRDQQPSAASSSFSSESLRDGHFDRHV
FDEACFYNADYMTARTKMAADILDNEELLESMDVYDIFVRYSGLHVFRAVEPALIQKYVR
RACNPRFSEDIYHRCVLSNLEGLGSRSHLAMALFEQEQANST
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctcctcgtttttggccctgttcaggcctgctttgccccttatcctcgggctg
tctctgggatgcagtctgagtcttttgatggtgtcctggacgcagggggacaccgatgac
tcctgtagggacgaactgggcaatgggagacttttcctgggtaggggagataaccagaga
gtctctagggatggagatgaagacttcactccgcatatagttccctatcacaaagaccca
aacaagccacacaagaaggtcctcagaactcgatacatccacactgagctgggcatcagg
gagcgactgctggtgggggtgctgacctctcgggccaccctgaacactctggccgtggcg
gtgaaccgcaccatcgcccaccacttccaccgcacctttttcttcacgggcctgcgcagc
cccaaggtgccccacggcatgactgtggtagcccacggcgacgatcgccctgtgtggctg
atgtacgagaccgtgcgccacctccaccagcactacggctcggactacgactggttcctc
ttagcccaagacgacacctacatgcaggcagatcgtctgtctgagctggtgggccacctc
agcgcggggcaggacctgtacatgggcagggcggaggagttcatcggcggggaggagaag
gcacgctactgccacgggggttacggctatttgctgtctcgcagtctgctggcccgtctg
cagccacatcttgacacttgtcgtaatgatatcctcagtgtgagacctgatgagtggctg
ggccgctgcattattgattacctgggtctcagctgtgtggaagtgcaccaggagatgacc
tatcgctactttgaactcgggaaaaacgcggatccggagcgtgaagacagcacccagttt
aaaaacgccttcacagtccatcctgtatcagagcctaatctcatgtaccgcctccacaaa
cgcttcagccagatcgagctggaatggacttacctccagatccaacagctccagatgcag
atcagcaacctgagtgacctgacaccagaaggaaaagctggagtcacatggccaataggc
atcaacccccccttcaaaccaagaacccgttttgaggttataaactgggagtacttcaca
gaagagcatatttactcgtgtgttgacagctccccgaagtgtgagatgagaggggcggac
cgagctgacgtaaacgcagtcctggagattgcggtggagcgcctgaacgagcgttaccag
ccccagctgcgcttccgtaaacgccgtctgctcaacggctaccggcgctttgatcccacg
cgtggtatggagtacatgctggacctcgcactggaggcctacacccagaaaggccacagt
caagtcattgtaaaacgggtcaacctgttgcgacctctcagcgccgtcgagattatcccc
atgccttatgtgacagaggcgacacgggtgcaggtcatcctacctgtcactgcccaggat
caggactatgtcagcaacttcctcgacatgtatgtgatgaacactcttgacacccatgat
aatgttttactcactttcttgttcatatatgatccatttgacgcacagcgggtcagccag
actgacgtgttcgctggcatcaaggccatgatcggggaggtggagaaacgctacggagac
gtgaagattccctggatcagcgtgaagacggaggtgccctcacaggtcaagctgatggac
atcatctctaagaagcatccggtggacacgctgtttttcctgtccagcgtgtggacagaa
gtcaacgccgacttcctgaaccgctgccgaatgaacgctatcagcaactggcaagtcttc
ttccccatccacttccaagagtacagccccgccgttgtctaccgcgaccagcagccctct
gccgcctcctcctctttctcctccgagtccctgcgagacggccactttgaccgccacgtc
ttcgacgaggcctgcttttacaacgcagactacatgaccgctcggaccaagatggctgct
gacatcttggacaacgaggagctgctggagagcatggacgtgtacgacatatttgtccgc
tactcaggcttgcacgtgttcagagctgtggagccggcgcttatccagaaatatgtgcgg
cgagcgtgcaacccgaggttcagcgaggatatctaccaccgctgcgtgctcagcaacctg
gagggtcttgggtcccgctcgcatctagccatggctctctttgagcaagagcaagccaac
agcacctag
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