Lates calcarifer (barramundi perch): 108895028
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Entry
108895028 CDS
T04895
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108895028 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895028 (asap1b)
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108895028 (asap1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
BAR
SH3_9
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
A2L_zn_ribbon
DUF4404
Motif
Other DBs
NCBI-GeneID:
108895028
NCBI-ProteinID:
XP_018549202
UniProt:
A0AAJ7VE36
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All DBs
Position
LG24:complement(14841478..14895146)
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AA seq
1154 aa
AA seq
DB search
MPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVNVLEEALDQDRTSLQKVKKSVKA
IYSSGQDHVQNEENYAQALDKFGSNFISRDNPDLGTAFVKFSSLTKELSALLKNLLQSLS
HNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRTEITG
AEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLKTADK
LKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKEDSQSKQGGYSMHQLQGN
KEFGSEKKGYLLKKSDGLRKVWQRRQCSVKGGILTISHATSNRQPVKLNLLTCQVKPSAE
DRKCFDLISHNRTYHFQAEDEQEFVIWISVLTNSKEEALNMAFRGEQSSGGEDGLEDLTK
AIIEDVLRMPGNEVCCDCGASDPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKL
GTSELLLAKNVGNSSFNEIMEGNLPSPSPKPTPSSDMTVRKEFINAKYVDHKYARKTCTS
AAAKMIELFEAVQSRDLLSLIQVYAEGVELMEPLPEAGPEAGETALHYSVRTADQTSLHL
VDFLVQNSGNLDKQTEWGNTALHYCCMYEKPECLKLLLRGKPATDITNQNGETALDVARR
LRNTQCEEALVQAAEGKFNPHIHVEYEWSLRLEEMDESDDDLDDKPSPIKKDRSPRPQSF
CHSSSLSPHDKLSLPGFISQRDKQQRLSYSAFTNQMYSASTDLTSSPVADGPPLPPRNQG
KAPHLAFLGSHSHYATLAGTRPYITPTPSGPPSTLTTGGSSTLSKKRPPPPPPGHKRTLS
DPPSPLSHSPHSKGGLTGGSDSTPPPVSKMSPVSNKFEGIPQQQSTTSSNTKSTLGPRVL
PKLPQKVALRKIDTIHHPSMDKPSLPPEVFQKSPPATDTPQKAPLGDRPQLGDLPPKPQP
SELPPKPGELPPKPQLSDLPPKPQLGDLPPKPQLKDLPPKPHLADIPPKPGTVESTPRPP
PGETTQRPQTQPPPPPQTQPQPQPQPQDSPSPNQQANIATPSHQPAEDTNGTPAGTAETP
VPLPRKINTGKSKARRVKTIYDCQADNDDELTFVEGEVIIVTGEEDQEWWIGHIEGDPER
KGVFPMSFVHILSD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcaaatatcggtgtccgagtttctctcggagacaacagaggattacaattcc
ccgacaacatccagctttaccacccgactgcagagctgcaggaacacagtgaatgtgctg
gaggaggcattggaccaggatcggacttccctgcagaaggtgaagaaatcagtgaaggct
atctacagttcaggacaagaccacgttcaaaatgaagaaaactacgcccaagctctggac
aaatttggcagcaacttcatcagccgggacaaccctgacctggggacggcctttgtcaag
ttctcctccctcaccaaggagctttctgccctgctgaagaacctgctccagagcctcagc
cacaatgtgatcttcaccctagactcgctgctgaagggcgatttgaaaggcgtgaaaggg
gacataaagaagccctttgacaaagcatggaaagactacgaggccaagtttacaaagata
gagaaggagaagcgagagcacgccaagcagcacgggatgatccgcaccgagatcaccggg
gctgaaatcgctgaggagatggagaaggagcggcgtctctttcagctccagatgtgtgag
tacctgatcaaagtaaatgagatcaagaccaagaaaggagtggacctcctccagaacctg
attaagtattaccacgcacagtgcaatttcttccaagatggcttgaagacagcggataag
ctgaagcagtacattgagaagctggcagctgatctctacaatatcaaacaaactcaggat
gaggagaagaagcagctgactgccctgcgagatctgatcaagtcctccctccagctggac
cagaaggaggactcacagagtaagcagggtggatacagcatgcaccagctgcagggaaac
aaggagtttggcagtgagaagaaaggctacctgctgaagaagagtgatgggctgaggaag
gtgtggcagaggaggcagtgctcagtgaaggggggcatcctcaccatctctcatgccaca
tccaacaggcagccggtcaaactcaacctgctcacctgccaggtgaagccgagcgcagag
gacaggaagtgctttgatctcatttctcataaccggacatatcatttccaagctgaagat
gaacaggagtttgttatctggatctcggtgctgaccaacagtaaggaggaagcgttgaac
atggcgtttcgtggcgagcaaagcagcggaggcgaggacggtttagaggaccttactaaa
gccatcatagaagacgtgctgcgcatgccaggcaacgaagtctgctgcgactgcggagcc
tcagaccctaagtggctttccaccaacctggggatcctcacctgcatcgagtgctccggc
atccaccgagagatgggggtccacatctcccgcatccagtccatggagcttgacaagcta
ggaacctcagaactcttgctggccaagaatgtagggaacagtagtttcaatgagatcatg
gagggaaacctcccttccccttcaccaaagcccactccctccagcgacatgacggtgagg
aaggagttcatcaacgctaagtatgtggaccacaagtacgcgaggaagacgtgcacgtct
gcggcagctaaaatgatcgagctgtttgaggcggttcagtccagggacctgctgtccctc
atccaggtctacgcagagggggtggagctcatggagccgctcccggaggctgggccggaa
gctggagagacagcactgcactactctgtacggactgccgaccagacctcactacacttg
gtggacttccttgtgcagaacagcggtaacctggataagcagacggaatgggggaacacc
gccctgcattactgctgcatgtacgagaagcccgagtgcctcaagttactcctgaggggc
aagccagccaccgacatcaccaatcagaacggagagacggcgctggatgttgccaggcga
ctgaggaacactcagtgtgaggaggcacttgtgcaggctgcagaggggaaattcaaccct
cacatccatgtggagtatgagtggagcctcagactggaggagatggacgagagcgatgac
gacctggatgataagccgagtcccatcaagaaggaccgctccccgaggcctcagagcttc
tgccactcctccagcctctccccccacgacaagctctccctgccgggcttcatcagccaa
cgggacaagcagcagcgtctgtcctacagcgccttcaccaaccagatgtacagcgcgtcc
accgacctcacctcctcccccgtggccgacgggccaccgctgccacccaggaaccagggc
aaagctccacacttggcattccttggctctcattcgcactacgccacactggctggcact
cgaccatacatcactcctaccccatctggccctccctctacactcacaacaggaggcagc
tccaccctgtccaagaagaggcctccgcccccacctcctggacacaaacgcaccctgtct
gacccacccagcccgctctctcacagtccacacagtaaagggggcttgactgggggaagc
gactccaccccgcctcccgtcagcaagatgtctcctgtttctaacaagtttgaaggcatt
cctcaacagcaaagcactacttcaagcaacacaaagtctacacttggtccaagggttctt
cccaaactacctcaaaaagtggcattgcggaagattgacaccatacaccacccgtctatg
gataagcccagccttcctccagaggtcttccagaagtccccgccagcaactgacacccct
cagaaggctcctctgggggacaggcctcagctgggagacctgccccccaaaccgcagccg
tctgaactcccccccaaaccaggagaacttcctccgaagccacagctctccgacctccct
cctaaacctcagctgggtgacctcccgcccaaaccccagctcaaagacctgccccccaag
cctcacctcgcagacatccccccgaaacctgggacagtcgagtccactcccaggccgcct
cccggagagacgacgcagaggcctcaaacgcaacctccgcctccgcctcaaactcagcct
caacctcaacctcagcctcaagactcgccgtcacctaatcagcaagctaatatagcgacc
ccctcccaccagcctgctgaggacaccaacgggactccagcaggaactgcagagacacct
gtgccacttccgaggaagatcaacacggggaagagcaaagcccgcagggtgaagacgatc
tacgactgccaggctgacaatgacgatgaactgacttttgttgaaggagaggtgattata
gttacaggggaggaggaccaggagtggtggattggacacattgaaggagatccagaaaga
aaaggggtgttccccatgtcttttgtgcacatcctgagtgactga
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