Lates calcarifer (barramundi perch): 108895031
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Entry
108895031 CDS
T04895
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895031 (nfx1)
04121 Ubiquitin system [BR:
lcf04121
]
108895031 (nfx1)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108895031 (nfx1)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108895031 (nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
108895031
NCBI-ProteinID:
XP_018549214
UniProt:
A0A4W6CZH7
LinkDB
All DBs
Position
LG24:14897259..14908410
Genome browser
AA seq
1085 aa
AA seq
DB search
MAEGFSDPPDLNPDGTPQDKPQQHKSRRGRPRHNNDRNLSSNSYDPSQQYGNFHQGFHPP
FNHNNSNYAEHQHPPWRGRGRGRREGNRGVNGSFGGSGSWWQKPGGDYGPHSGRNRGVYH
SGAHPMDGPDSPNWRREDVSRNLEQTNEDQDARAKKPRKFSQEHRRGEQNKRGTHLKENN
TSEEHQRPDDTKGENQPSEARERSQRSRAAPDSQHDDHQRKHSEAKRRQGPIKPPRQPSQ
EEVGSEGGASGQDYPDYGRSSQNPSSKAGGGSGRHAPRGGRGRTHHQNHRPGTRNWNKMP
ESKETQTGCLIEQLSEEKYECMVCCDIIRLMAPVWSCQSCFHVFHLNCIKKWARSPASQA
DDSTEGWRCPACQNVALKQPTSYTCFCGKVTNPEWQRSEIPHSCGDMCGKKRSGVDCNHP
CNILCHPGPCPQCPAFVTKSCICGKTSQPMRCGQGTVLQCDKMCGALLNCAEHTCTQVCH
SGACQPCQLQVQQVCYCGVTTRKVLCGTDKEGFDGLGHFSCQKTCGKMLDCEAHRCQQVC
HRGPCQPCPRSPTLVRTCPCGQTQLAKLLELGYSERQSCSDPIPSCGKTCNKPLACGSSD
TIHLCEKLCHEGSCGPCSLTSTIRCRCGSKTKEVPCVTIQTEDELVFTCEKRCNKKRSCG
RHKCGELCCVAVEHKCPLICGYKLNCGLHRCQEPCHRGNCEPCWQSSFDELTCHCGLTVL
YPPIPCGTKPPECKNLCTRRHECDHPVFHNCHSDEKCPPCTYLTQKWCMGKHEQRSNIPC
HLQDISCGLTCNKSLPCEMHRCRRICHRGDCLAEGGCQQPCTLPRPDCGHPCSAPCHNGS
SCPRTTCTAKVALQCDCGRRKETVVCTEAASSYQRYAAIAMASKLSDMQLGDSMDIGPLL
TKKELKQTRLECDEECATLERNRRLAEALQIDPSSDPFNVRSTAIYSDSLKEDARKDLKF
VSGVEEEIKNLVELVNKGKQPKRTHCFPPMNRDHRKTVHELAEVYGVESVSYDSEPKRGV
VITAQKGKSACPNSTLTSLIERETAARAPPPIAHIKQHSSKVSSGTTWSKMVKEEPVIDY
FDVQD
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggcttctcagacccacctgacctcaatccagatgggacgccacaagataag
ccacagcagcacaaatccagaagaggtcgacccagacacaacaatgacagaaacctgagt
agtaatagttatgatccctctcaacagtacggaaactttcatcagggctttcacccccca
tttaaccataataattcaaattatgcagagcatcagcatcctccctggagaggcagaggc
agagggaggagagaagggaacagaggtgtaaatgggagttttggcggctccggctcctgg
tggcaaaaacctggaggtgactatggtccacacagtggcagaaacaggggtgtctaccac
tcaggtgcacatcccatggatggacctgatagtccgaactggcgaagagaagacgtgagc
agaaatttggaacaaaccaacgaagaccaggacgctcgggcgaaaaaacccaggaagttt
agtcaggagcacaggagaggagagcaaaacaagagaggcacccacttaaaagagaacaac
acttcagaagagcatcagagaccagatgacaccaaaggagaaaatcagccttcagaggcc
agagagagaagtcagaggagcagggcagctccagactctcaacatgatgatcatcagagg
aaacactcagaggcaaagcgacgacaagggccaatcaaaccacccagacaaccatctcaa
gaggaggtgggatcagaggggggggccagtggtcaagattacccagactatggcagatcg
tctcagaatccatccagtaaagctgggggaggctcgggacgacacgcgcccagagggggg
agaggacgaacacaccatcagaaccacagacctggcaccaggaactggaacaagatgcca
gagagcaaggagacacagacagggtgtctaattgaacagctgtccgaagaaaaatacgag
tgcatggtgtgctgtgatatcatccggctcatggccccggtgtggagctgccagagctgc
ttccacgtcttccatctgaactgcatcaagaaatgggctcgatctccagcctctcaggca
gatgattcaactgaaggatggcgttgtccagcctgccagaatgtagcgctgaaacaacca
acctcctacacctgcttctgtggtaaagtgacgaacccagagtggcagcgcagcgagatt
ccccacagctgtggtgacatgtgtggaaagaaaagaagtggagtggactgcaaccacccc
tgtaacattttatgtcacccaggaccttgtccacagtgtcctgcctttgtaactaaatcc
tgcatatgtgggaagaccagtcaaccaatgcgctgcggccagggtactgtcctgcagtgt
gacaaaatgtgcggtgctttactcaactgtgccgaacatacctgcacacaggtctgccac
agcggggcgtgtcagccctgccagctgcaggttcaacaggtttgctactgtggagttaca
actcgtaaagtcctgtgtggaacagataaagaaggatttgatggtttgggacatttctcc
tgtcagaaaacatgtggaaagatgttggactgtgaagcccaccggtgccagcaggtgtgc
caccgcggtccctgtcagccgtgcccacgctctccaaccctggtgaggacttgtccctgc
ggtcagacgcagctggccaaactcctggaactgggctactcagaacgacaaagctgctct
gatcccatcccctcctgtggaaagacgtgcaacaaacccctggcctgtggctccagtgac
accatccatctgtgtgagaagctctgccatgagggcagctgtgggccctgctcgctgacc
tccactatcagatgcagatgtggctccaagaccaaggaggtcccatgtgtgacaatccag
acagaggatgagctcgtcttcacctgcgagaagcgctgcaacaagaaacgctcctgtggc
cgacacaagtgtggcgagctgtgctgtgtggctgtggagcacaagtgccccttgatctgc
ggctacaagctcaactgtggcctccaccgctgccaggagccctgtcaccgtggaaactgt
gaaccctgttggcagtccagttttgatgagctgacgtgtcactgtgggctcactgtgctg
tacccgcctatcccctgtggcaccaagccaccagagtgcaaaaacctgtgtacaagaaga
catgagtgtgaccacccggtgtttcacaactgccacagtgacgagaagtgtccaccctgc
acatacctcactcagaaatggtgcatgggaaagcacgagcaacgcagcaacatcccatgt
catctgcaagacatttcttgcggcctgacatgtaacaaatcgttgccatgtgaaatgcac
cgctgcagacggatttgccaccggggcgactgcctggcagaaggcggctgccagcagccc
tgcacgctgcctcggccagactgcggccacccgtgctccgctccctgtcataacggcagc
agctgcccacgcaccacctgcactgccaaggttgctctgcagtgtgattgtggtcgaaga
aaggagacagtcgtctgcacagaagcagccagttcctatcagaggtatgcagccattgcc
atggccagtaaactgtctgacatgcagctcggcgactccatggacattggcccgctcctg
actaagaaagagctcaaacaaaccaggcttgaatgtgatgaagagtgtgctactttggag
agaaacaggcgcttggccgaggcgctacagatagacccgtcttctgaccccttcaacgtc
cgctccaccgccatatacagcgacagcctcaaagaagacgccagaaaagaccttaaattc
gtcagtggggtagaagaggagatcaagaatcttgttgagcttgtgaataagggaaaacag
ccaaagaggacccactgtttcccgcccatgaaccgagatcaccggaagaccgtccatgag
ctggctgaggtctatggagtggagagcgtgagctacgacagcgagcccaaacgtggtgtg
gtcatcacggcccaaaaggggaagtcagcctgtccaaactctaccctgacatcactgata
gagagagagacggctgccagagcccctcctcccatcgctcatatcaaacaacacagcagc
aaggtttccagtggaaccacctggtcgaagatggttaaagaagagcctgtgatagattat
tttgacgtccaggactaa
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