Lates calcarifer (barramundi perch): 108895032
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Entry
108895032 CDS
T04895
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895032
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108895032
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
FtsX_ECD
HOCHOB
Motif
Other DBs
NCBI-GeneID:
108895032
NCBI-ProteinID:
XP_018549216
UniProt:
A0A4W6CQA0
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Position
LG24:14595869..14661166
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AA seq
661 aa
AA seq
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MITGQLSKPLLSLRSNMSAAELRADDKAATPDSELNDEPLLLPSEATDREGTPNKLYGAR
DGSVQSDASSSPSEQSQLGQSHPGYPLGPQSLLVAQQLANAVGGVMSGAAPGMNQPILIP
FNAGGHLGGQQGLVLSLPTANIQSLVAAAAAGGIMTLPLQNLQATSSLNSQLQHLQQLQQ
MQQHHQQQQQHQQQQQQQHHHQQTHSHAQNQLSSQHHMTPPNQQQTSVPSPGSACSSTSG
QPQQSPPHRPNQSPVRSLPSPVTPPMPLPLNPLASQAAVAAAAAMGSIAGSQVFGNTLSN
LQGATGQLVTNAQGQIIGTIPLMPNSAGPSSQSGGGNPALQVQPITPQLLTNAQGQIIAT
VIGNQILPVINTQGITLSPIKPGQQLPQAQQGQTGPASSQPNLLHMPHRQSPLHQASSSS
STSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSA
AEGPAYSQSAICRHTILRSHFFLPQEAQENTIGSSLTGKLNPGLLYPARFEKLDITPKSA
QKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTH
PSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPELGAAAPMDPLTDSLEELP
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagctgagcaagccgctgctctccttgcgcagcaacatgagcgcggca
gaactccgggcggatgacaaagcggccaccccagacagcgagctgaacgacgagcccctg
ctcctgccctccgaggccacggacagagagggcactcccaacaagctttacggagctcgc
gatggttcagtccagtctgatgccagcagcagtccttcagagcagagtcagctgggccag
tctcacccaggatacccactgggtccacagtctctcctggtggcgcagcagctggccaac
gcagtaggtggcgtgatgtccggggcggcaccgggcatgaaccagcccatcctcattcct
ttcaacgcaggcggacacctgggtgggcagcaaggcctggtcctctccttgcccacggcc
aacatccagagcctggtggctgctgctgctgcggggggcatcatgacgctccccctccag
aacctgcaagctacctcatcactcaactcccagctccagcacctgcagcagctccaacag
atgcagcagcaccaccagcagcaacagcaacatcagcagcaacagcagcagcaacaccat
catcaacagacccactcccacgcccagaaccagctgtcatcccagcatcacatgacccca
cccaaccagcagcagacctccgtcccgtctccgggctcggcctgctcctccacctctgga
cagccgcagcagtctccgccgcaccgacccaaccagtcgccggtccgcagcctcccttct
cccgtcaccccgcccatgcctttgccactgaatcctctggccagccaggcagcagtagca
gcagcagcagccatgggatcaatcgccggttctcaggtgtttggcaataccctgtcaaac
ctgcaaggagccaccggacagctggtcaccaatgcacaaggacagataattggaacaatc
ccactgatgcccaactctgcagggccctccagccaatcagggggtggcaacccagcactg
caggtacagccaattacacctcagcttctgaccaacgctcaaggccagatcatcgccacg
gtgatcggcaatcagatcctgcctgtcatcaacacccagggaatcacactgtcaccaatc
aagcctggacagcagctgcctcaggctcagcagggtcagacaggccctgcatcgtctcag
cccaacctgctccacatgccccacagacagagccctctccaccaggcctcttcctcctca
tccacctcttcctcttcctcagctctcagcgtggggcagctagtcagcaacccgcagacc
gcccccagcgaggtggacggggtcaacctggaggagattcgtgaatttgccaaagcattc
aagatccgccggctgtccctgggcctgacacagactcaggtgggccaggcgctcagcgcc
gccgaagggccggcgtacagtcagtctgccatctgcagacacaccatcctgagaagccac
tttttcctaccacaggaagcccaagagaacactataggtagcagtctgacaggcaaactg
aaccctggccttttatatcctgccaggtttgagaagttggacatcacccctaaaagcgcc
cagaagattaagcccgttctggagcgctggatggccgaggctgaagcccgccaccgatcc
ggcatgcagaacctgactgagtttatcggcagtgagccttcgaaaaaacgcaagcggagg
acctctttcaccccgcaggcgctcgagatcctcaacagccactttgagaagaacacacac
ccctctggacaggaaatgacggaaatagctgagaaactgaactatgacagggaggtggtg
cgtgtctggttctgcaacaagaggcaagccttgaaaaacacaataaagcgtttgaaacag
cccgaactcggcgcggctgcacccatggaccctctcactgattctctagaggagctccca
aaatga
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