Lates calcarifer (barramundi perch): 108895043
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Entry
108895043 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: C-terminal-binding protein 1
KO
K04496
C-terminal binding protein [EC:
1.1.1.428
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108895043
04330 Notch signaling pathway
108895043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895043
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.428 4-methylthio 2-oxobutanoate reductase (NADH)
108895043
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Macropinocytosis
Others
108895043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
F420_oxidored
XdhC_C
Motif
Other DBs
NCBI-GeneID:
108895043
NCBI-ProteinID:
XP_018549222
UniProt:
A0A4W6FZ88
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All DBs
Position
LG8:complement(19362941..19385168)
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AA seq
440 aa
AA seq
DB search
MGSSHLLNKGMPLGIRPPIMNGPMHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQ
EIHEKVLNEAVGALMYHTITLMREDLEKFKALRIIVRIGSGYDNIDIKSAGELGIAVCNM
PAASVEETADSTLCHILTLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGLI
GLGRVGQAVALRAKAFGFNVIFYDPYLADGVERSLGLQRVTTLQDLLFHSDCVSLHCSLN
EHNHHLINDFTIKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHETEPFSFS
QGPLKDAPNLICXPHAAWYSEQASLEMREEAAREIRRAVTGRIPDSLKNCVNKEFLTRXN
HWAGVDPATVHPELNGAYRYPTGVVSLPAGGLPPPVEGIVPSAVPITHTLPPAVTHPPHA
PSPGQNTSQATRGRQRATSK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggaagctcacatctcctcaacaaaggcatgcctctaggcatcaggccacccatcatg
aacgggcccatgcacccgcgccccctggtggcgctgctggacgggcgcgactgcactgtg
gagatgcccatcctgaaagatgtagcaactgtggccttctgtgacgctcagtccacacag
gagatccatgagaaggtgctgaatgaagcagtaggagctctgatgtaccacaccatcact
ctgatgagagaagacctagagaagtttaaagctctgcgtatcatcgtccgcatcggcagc
ggctatgacaacattgacatcaaatcagccggggaactgggcatcgccgtatgtaatatg
ccagcagcttcagtggaggagacggcggactccacgctgtgtcacatcctcaccttatac
cgacgtaccacctggctgcaccaggctctccgggagggcacacgggttcagagcgtggag
cagatccgagaggtggcgtcaggagcggcgaggatcagaggagagacactgggactcata
gggctgggtcgagtgggccaggctgtagccctgcgtgccaaggcctttggcttcaatgtg
attttctatgacccttatttggctgacggagtagaaagatccctgggactacaaagggtc
accacactacaggacctgctcttccactccgactgcgtgtctctgcactgcagcctgaac
gaacacaaccaccacctgatcaacgacttcaccatcaaacagatgcgtcagggggcgttc
ttggtaaatacagccagagggggtttggtggatgagaaggccctggctcaggctctgaag
gaggggaggatacgtggagctgctctggatgttcacgagacagaacctttcagtttcagt
cagggcccgctaaaggatgcccccaacctgatctgcnacccacatgctgcctggtacagt
gaacaggcatcgctggaaatgagagaggaggcagccagggagatccgaagggctgtcaca
gggcgtatcccagacagtttgaagaactgtgtgaataaggagttcctcaccaganacaac
cactgggcaggagttgacccagctaccgtccaccctgagctaaatggggcttataggtat
cccactggagtggtaagcttgccagccggtggcctcccgcctccggtcgaaggcattgtg
cccagcgctgtgcccatcacacacaccctcccccctgccgtcacacaccctcctcatgcc
ccgtctcctggacaaaacaccagtcaagccaccagagggcgacagagagcaacatccaaa
tga
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