KEGG   Lates calcarifer (barramundi perch): 108895046
Entry
108895046         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108895046
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    108895046
SSDB
Motif
Pfam: LRR_8 LRR_4 I-set Ig_3 LRR_5 ig Ig_2 LRR_LRWD1 LRR_9 V-set LRR_EndoS LRR_6 LRR_RPS2 Sp38 Receptor_2B4 DUF7617 C2-set_2 C2-set_3 Ig_6 Ig_C17orf99
Other DBs
NCBI-GeneID: 108895046
NCBI-ProteinID: XP_018549228
LinkDB
Position
LG8:complement(19672097..19712187)
AA seq 613 aa
MVDCMSKVMLHTVVSCWQPFLGLALVAVFVGSTLGCPSRCECSAQSKAVVCHRKRMPSIP
DGIPTETRILDLSKNKLTMINPDDFVAFPGLEELDLSGNIISYVEPGAFNALFNMHSLSL
KSNRIKLIPLGVFAGLTNLTRLDISDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLEILTLERCNLTVVPTEALSHLHNLVSLHLRYLSISTLHPYSFKKLFRLRHLEI
DNWPLLDHVPANTLHGLNLTMLFITNTNLSSFPYQALKHLPYLTHLNLSFNRIRHIEGGM
LMELVRLRELHLVGAQLTTIEPYAFQGLRGLKVLNVSHNRLDTLEKGVFQSPEALEVLLI
DNNPLVCDCRLMWILQKRHSIFFGDSQPECSTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENKTQTITVDEGQQAMLRCSAEGTPRPIVSWLSPRRRVLTSRSHGRVTVHNNGTLEIKS
AEVQDSGVYLCLASNTAGNDTLMTSLAVKSLGSLYANRTQYYTDPSNTTANGTTGVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSAE
GQAGPRRFNMKMM
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggtcgactgtatgagcaaagtcatgctgcacacggtcgtctcatgctggcaaccattc
ctgggactggccctcgtggctgtctttgtgggctctaccctgggatgtccctcgcgctgc
gagtgttcagcgcagagcaaggcagttgtctgtcaccgtaaacgcatgcccagcatcccg
gacggcatcccaacagagacaaggatcctggacctgagtaagaacaaactgacaatgatc
aaccctgacgactttgttgcctttcctgggcttgaagaacttgacctcagtggaaatatt
atcagttatgttgaacctggagctttcaacgccctgtttaacatgcactcactcagtctt
aagagcaatcgtatcaagctcattcctctaggcgtctttgcaggtttaactaatcttacc
cgactggatataagtgacaacaagatcgtcatcctcctggattacatgtttcaggacttg
cacaacctaaagtttttggaagtgggtgacaatgatctggtttacatttctcaccgtgct
ttcagtggacttttaagcctggagatactaaccctagaaagatgcaatcttacagttgtg
cccactgaggccctctcccacctgcataaccttgtcagcctccatctgcgatacctcagc
atcagcactttgcatccttactcattcaaaaagctattccggctgcggcatttggaaatt
gacaattggcctttgctagaccatgtgccagccaataccctgcatggcctcaacctgacg
atgctgtttataaccaacactaacttgtcctccttcccttaccaagccctgaagcatctg
ccctacctgacacacctcaacctgtccttcaaccgcatcaggcacattgaggggggtatg
ctcatggagctggttcggctgcgagagctccatctggttggtgctcagttaaccaccatt
gaaccgtatgccttccagggcctgcggggtcttaaagtccttaatgtctcacataaccga
ctggatacactagagaagggtgtttttcagtcccctgaggctctcgaggttcttctgatc
gacaacaaccccttggtgtgtgactgtcgtctcatgtggatcctacagaaacggcattcc
atattctttggggattcacagccagagtgcagtacacctgagggtatccgtggcaggcct
tttaaggagtttaaagagactcttctgtcttattacgtaacatgcaccaagccaaaaatt
cgtgagaataaaacacaaacaatcactgtggatgaaggtcagcaggcaatgttgcgctgc
agtgctgaggggacaccaagacctattgtttcctggttgtccccacgccggcgagttctg
acaagtaggagccatggtagagtgaccgtccacaacaatggtaccttggaaatcaagtca
gcagaggtacaagacagcggagtgtacctttgccttgcatcaaacactgctgggaatgac
accctgatgacttcactggcggtgaaaagtctgggatcgctgtatgctaacaggacccag
tactacacagatcccagcaataccactgccaatgggacgaccggtgtgaccctcggtttg
gacctaaagactattctagtgtcaacagctatgggttgttttacgttcctgggagtggtc
ttgttttgtttcctgctcctttttgtttggagcagaggaaaaggaaaacataaaaacaac
atagatgttgaatatgtgcctcggtcaaagtctaatggcactaacgttgactcggcagag
ggacaagctggtcctcgtcgttttaacatgaaaatgatgtga

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