Lates calcarifer (barramundi perch): 108895106
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Entry
108895106 CDS
T04895
Symbol
cldn2
Name
(RefSeq) claudin-2
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecule (CAM) interaction
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108895106 (cldn2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108895106 (cldn2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108895106 (cldn2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108895106 (cldn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108895106 (cldn2)
04147 Exosome [BR:
lcf04147
]
108895106 (cldn2)
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108895106 (cldn2)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108895106 (cldn2)
Exosomal proteins of colorectal cancer cells
108895106 (cldn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
108895106
NCBI-ProteinID:
XP_050934789
UniProt:
A0AAJ8BMY2
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Position
LG20:complement(2730507..2752713)
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AA seq
273 aa
AA seq
DB search
MASAALELMGFFLGLLGMVGTLVATVLPYWQTSAHIGSNIVTAVANMRGLWMECVYQSTG
AFQCETYNSMLALPSDLQASRALMVISVVMSILAIAMASLGMQCTLCLEGSGAVKSRVAG
AGGGLFFTAGFLALIPVAWTTHEVVQTFYRPNVPASMKYELGECIYVGLASALISMLGGG
MLCVSCCEEQDGGRGRRHGGGYPYPAGGGVSGTGVRTTSQIYRNPTLQVGGINTPSRGQT
LVRSTSDSSHSGTRGVQGGKKPTAAGYDVTGYV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcagctctggagctgatgggtttcttcctgggcctgctggggatggtgggc
accctggtcgccacagtgctgccatactggcagacctctgcccacatcggctccaacatc
gtcacggctgtggccaacatgaggggcctgtggatggagtgtgtgtatcagagcacaggg
gccttccagtgtgagacctacaactccatgctggcccttccctccgacctgcaggcctcg
cgtgctctcatggtcatctccgtggtgatgtctatcctcgcgattgccatggcgtccctg
gggatgcagtgcactctttgcctggagggctcaggtgcagtgaagagtcgcgtggctggt
gccggcgggggcttattctttactgcgggctttctggcgcttatacctgtggcgtggacc
acgcacgaggttgtccagaccttctacagaccaaatgtacctgccagcatgaagtacgag
ctgggggagtgcatatacgttggtctggcctcagcgctcatctccatgctgggagggggg
atgctgtgtgtgtcgtgctgcgaggagcaggacggcgggcgcgggaggcggcacggtgga
gggtatccgtatccggctgggggcggtgtgtcaggcacaggggtacggacgacctcgcag
atctaccgcaatcccaccctgcaggtggggggcatcaacacacccagcagggggcagaca
ctggtacgaagcaccagtgacagctcccactcgggcacacgcggagtccagggaggcaag
aagcccacggcggcaggttatgatgtcacaggatacgtctga
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