Lates calcarifer (barramundi perch): 108895162
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Entry
108895162 CDS
T04895
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108895162 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108895162 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108895162 (chrna1)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108895162 (chrna1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TMEM138
Motif
Other DBs
NCBI-GeneID:
108895162
NCBI-ProteinID:
XP_018549312
UniProt:
A0A4W6BT34
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Position
LG16_LG22:complement(17077706..17091684)
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AA seq
459 aa
AA seq
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MNLPKIKILLAWILSAFAGPVFCSEDETRLVKTLFTGYNKVVRPVNHFSEAVVVTVGLQL
IQLISVDEVNQIVTSNVRLRQQWIDVNLKWNPDDYGGIKKIRVPSTDIWKPDLVLYNNAD
GDFAIIHETKVLLESTGQITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLVV
INPDNDRPDLSNFMESGEWVLKDYRSWKHWVYYTCCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIIITVIVINTHHRSPSTHTMPAWIRKVFIETIPNMMFFSTMKRPSQEIR
QKRLFPTDMDISDISGNPTPTSVTYQSPIVKNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTLAVFAGRLIELNML
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcctaagatcaagatcttgctggcatggattctcagtgcatttgccggccca
gtattctgctcagaagatgagactcgtctggtgaaaaccctgtttactggttacaacaaa
gtggtccgtcccgttaaccacttcagtgaagccgtagtagtcacagtgggactgcagcta
atacagcttatcagtgtggatgaagttaaccagattgtgaccagtaatgtccggctaaga
cagcaatggatagatgtgaacctgaagtggaatccagacgattacggaggcatcaaaaag
atcagagtcccttcaaccgacatatggaaacctgacctggtcctatacaacaatgctgat
ggtgactttgccatcatccatgaaacaaaagtcctgctggagagcactggacagataaca
tggaatcctccggccatttttaagagctactgtgagattattgtactccatttcccgttc
gacctgcagaactgtagcatgaaactgggaacctggacatatgatggactgctggtcgtc
atcaacccagacaacgatcgtccagacctcagtaacttcatggaatcgggagagtgggtg
ttgaaggactacaggagctggaaacactgggtttattacacctgttgtcctgacacacca
tacctggacatcacctaccatttcctgatgctgcggctgcctctttattttattgtcaat
gtcatcattccctgtatgctgttttcatttctcaccggactggtcttctacctacctact
gactctggtgaaaaaatgactctctccatctctgtcctgctgtctctgactgtcttcctg
ctggttattgtggagctgatcccctccacctccagtgctgttcctctcatagggaaatac
atgctcttcacaatggtgtttgtcatcgcctccatcatcatcactgtcatcgttattaac
acgcatcaccgctcgcccagcacgcacaccatgcctgcgtggatccgtaaagtgttcatt
gaaaccattcccaacatgatgttcttctcaacaatgaagcgccccagtcaggagatccga
cagaagagactgttccctactgacatggacatctctgacatctcaggtaaccccaccccc
acaagtgtcacctaccagtctcccatcgttaaaaaccctgatgttcgcagcgccattgag
ggggtgaagtacatcgctgagaccatgaaatcggacgaggaatctaacaatgcagcagag
gagtggaagtttgttgccatggttttggaccacatcctgctctgcgtgttcatggccgtg
tgcatcatcgggacgcttgctgtctttgctgggaggcttatcgagctcaacatgctgtag
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