Lates calcarifer (barramundi perch): 108895213
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Entry
108895213 CDS
T04895
Name
(RefSeq) mucin-3A isoform X1
KO
K22023
mucin-6/19
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895213
Membrane trafficking [BR:
lcf04131
]
Others
Mucins
Secretory mucins
108895213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
108895213
NCBI-ProteinID:
XP_050931504
UniProt:
A0AAJ8BGK1
LinkDB
All DBs
Position
LG14:complement(712176..737307)
Genome browser
AA seq
1763 aa
AA seq
DB search
MAFSSHLLIISAFLICLCPADEYFSIREQQWSKISAPGQTAGNDSVKSKHAETTIVPEQT
VQTNSLNGNEVTSEPAGTTRVSESTTPTNLVPSEPAEKTPAVEATSPTHPSETTTVPEST
AQTKILTSQPTKTTSLSQSTPVTDTVTSNPTNITLVPEETNTTNSVTSDPSETTSLPILT
DSTTSEPVSTTAVSQSISPTVPVTSDPSETTSLPIPTDSTDTATSEPASTTTFSQSISST
VPVTADPSETTSLPLPTGSTNTVTFEPTSTTMVSQSISPTVPVTSDPSETTSLPLPPDST
NTVTFESTSTTVISQSTSPTVPVTSDPSETTSLPLPTDSTDTATSEPASTTAVSQSISPT
VPVTSDPSETTSLPIPTDSTDSPTSEPVSTTTTASQSVSPTVPVTADPSETSSLPLPTGS
TNTVTFEPTSTTMVSQSISPTVPVTSDPSESTSLPIPTDSTDSPTSEPVSTTTTASQSVS
PTVPVTSDPSETTSLPIATDSTDTATSEPASTTMFSQSISPTVPVTSDPSETTSLPLPTD
STDTATSEPASTTAVSQSISPTVPVTSDPSESTSLPIPTDSTDSPTSEPVSTTTTASQSV
SPTVPVTADPSETSSLPLPTGSTNTVTFEPTSTTMVSQSISPTVPITADPSETTSLPLPT
GSTNTVTFEPTSTTMVSQSISPTVPVTSDPSESTLLPIPTDSTDSPTSEPVSTTTTASQS
VSPTVPVTADPSETSSLPLPTGSTNTVTFEPTSTTMVSQSISPTVPVTSDPSETTSLPVS
TDSTNTATSESASTTMVSQSISPTVPVTSDPSESTSLPIPTDSTDSPTSEPVSTTTTASQ
SVSPTVPVTSDPSETTSLPIATDSTDTATSEPASTTMFSQSISPTVPVTSDPSETTSLPL
PTDSTDTATSEPASTTAVSQSISPTVPVTSDPSESTSLPIPTDSTDSPTSEPVSTTTTAS
QSVSPTVPVTADPSETSSLPLPTGSTNTVTFEPTSTTMVSQSISPTVPITADPSETTSLP
LPTGSTNTVTFEPTSTTMVSQSISPTVPVTSDPSESTLLPIPTDSTDSPTSEPVSTTTTA
SQSVSPTVPVTADPSETSSLPLPTGSTNTVTFEPTSTTMVSQSISPTVPVTSDPSETTSL
PVSTDSTNTATSESASTTMVSQSTSPTVPVTSDPTETTSLPIATDSTETVTSEPAGTTTV
SESTGPTISVTSEPAVTTTAPEPSTTQPAETSESTGSTDTVTSVTAGTTLISESTNPSPT
NTVTSESAETTTSTEATSHPPLTQPSGPPSSPPTEPTTTSTITPTNLPTVRPTIPSTKPP
TDLPATLPTTPPATPTTQTTTKPFTTAESYKCQNGGYFNGFNCTCLAGFSGKLCQYVEMV
EPDALNRSVLVHVEINQQFNDKYDDKTSSEYKEFVGNFTDQMKTYYQKKNIANFKGVVVT
SVSRGRPLVRLSDNAVEEMTLSTEAVAIYSITSRADSISVTHDVVLVIPNNASSEQQYLD
DFEAVKEAVNELVDCTGDCPYNVTDQPIVNTTEVDLGSVCEELVNNPDVAEFYEPVPVHG
VITCVTICNSLHSRPKTCYNKGTCRVYRDVGPLCECQAVNSTWYLGNDCRFPIQRTAFYA
GLSVTLAFLLVTIGALTAHVLINNHKQTQRRDIKEKLVNQWFNEDFKWSRSNSPLDAYNA
GGYRNPSFPQEDSASHRKDPGDYRRPVDNRLPSSSVSMFPSLQTAPRHDTPLSNGNVALP
LRDLSSNLPMRISRPRIRTSWDA
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcttcacatctcctgattatctctgctttcctcatctgcttatgtcctgct
gatgaatatttctcaatccgtgaacaacagtggtctaaaatctctgcacctggacagact
gctggaaatgattcagtgaaatctaagcatgctgagacaaccatagtacctgaacaaact
gttcaaactaacagtttgaacggcaacgaagtaacatctgagcctgctggaaccaccaga
gtttctgaatcaaccactccaaccaatttagtaccatctgaacctgctgagaaaacacca
gcagttgaggcaactagtccaacacacccttctgagacgaccacagtacctgaatccaca
gctcagactaaaatattaacatcacagcctacaaaaaccacttcactatctcagtctaca
cctgtaactgacacagtaacttctaatcctactaacatcaccttggtacctgaagaaacc
aatacaactaattcagtaacatctgatcctagtgagaccacttcactacctatacttaca
gattcaacaacatctgagcctgtcagtaccacagcagtttctcaatcaatcagtccaact
gttccagttacatctgatcctagtgagaccacttcactacctatacctacggattctaca
gatacagcaacatctgagcctgccagtaccaccacgttttcacaatccatcagttcaact
gttccagttacagccgatcctagtgagaccacttcactacctttacctacaggttctaca
aatacagtgacatttgagccaaccagtaccaccatggtttctcaatcaatcagtccaact
gttccagttacatccgatcctagtgagactacttcacttcctttacctccagattctaca
aatacagtgacatttgagtctaccagtaccacagtgatttctcaatcaaccagtccaact
gttccagttacatccgatcctagtgagaccacttcactacctttacctacggattctaca
gatacagcaacatctgagcctgccagtaccacagcggtttctcaatcaatcagtccaact
gttccagttacatctgatcctagtgagactacttcactacctatacctacagattctaca
gattcaccaacatctgagcctgttagcaccaccaccacagcttctcaatcagtcagtccg
actgttccagttacagccgatcctagtgagaccagttcactacctttacctacaggttct
acaaatacagtgacatttgagccaaccagtaccaccatggtttctcaatcaatcagtcca
actgttccagttacatctgatcctagtgagtctacttcactacctatacctacagattct
acagattcaccaacatctgagcctgttagcaccaccaccacagcttctcaatcagtcagt
ccgactgttccagttacatctgatcctagtgagaccacttcactacctatagctacagat
tctacagatacagcaacatctgagcctgccagtaccaccatgttttcacaatccatcagt
ccaactgttccagttacatctgatcctagtgagaccacttcactacctttacctacggat
tctacagatacagcaacatctgagcctgccagtaccacagcggtttctcaatcaatcagt
ccaactgttccagttacatctgatcctagtgagtctacttcactacctatacctacagat
tctacagattcaccaacatctgagcctgttagcaccaccaccacagcttctcaatcagtc
agtccgactgttccagttacagccgatcctagtgagaccagttcactacctttacctaca
ggttctacaaatacagtgacatttgagccaaccagtaccaccatggtttctcaatcaatc
agtccaactgttccaattacagccgatcctagtgagaccacttcactacctttacctaca
ggttctacaaatacagtgacatttgagccaaccagtaccaccatggtttctcaatcaatc
agtccaactgttccagttacatctgatcctagtgagtctactttactacctatacctaca
gattctacagattcaccaacatctgagcctgttagcaccaccaccacagcttctcaatca
gtcagtccgactgttccagttacagccgatcctagtgagaccagttcactacctttacct
acaggttctacaaatacagtgacatttgagccaaccagtaccaccatggtttctcaatca
atcagtccaactgttccagttacatctgatcctagtgagaccacttcactacctgtatct
acagattctacaaatacagcaacatctgagtctgccagtaccaccatggtttctcaatca
atcagtccaactgttccagttacatctgatcctagtgagtctacttcactacctatacct
acagattctacagattcaccaacatctgagcctgttagcaccaccaccacagcttctcaa
tcagtcagtccgactgttccagttacatctgatcctagtgagaccacttcactacctata
gctacagattctacagatacagcaacatctgagcctgccagtaccaccatgttttcacaa
tccatcagtccaactgttccagttacatctgatcctagtgagaccacttcactaccttta
cctacggattctacagatacagcaacatctgagcctgccagtaccacagcggtttctcaa
tcaatcagtccaactgttccagttacatctgatcctagtgagtctacttcactacctata
cctacagattctacagattcaccaacatctgagcctgttagcaccaccaccacagcttct
caatcagtcagtccgactgttccagttacagccgatcctagtgagaccagttcactacct
ttacctacaggttctacaaatacagtgacatttgagccaaccagtaccaccatggtttct
caatcaatcagtccaactgttccaattacagccgatcctagtgagaccacttcactacct
ttacctacaggttctacaaatacagtgacatttgagccaaccagtaccaccatggtttct
caatcaatcagtccaactgttccagttacatctgatcctagtgagtctactttactacct
atacctacagattctacagattcaccaacatctgagcctgttagcaccaccaccacagct
tctcaatcagtcagtccgactgttccagttacagccgatcctagtgagaccagttcacta
cctttacctacaggttctacaaatacagtgacatttgagccaaccagtaccaccatggtt
tctcaatcaatcagtccaactgttccagttacatctgatcctagtgagaccacttcacta
cctgtatctacagattctacaaatacagcaacatctgagtctgccagtaccaccatggtt
tctcaatcaaccagtccaactgttccagttacatctgatcctactgagaccacttcacta
cctatagctacagattctacagagacagtaacatctgagcctgctggaaccaccacagtc
tctgaatcaactggtccaaccatttcagtaacatctgaacctgctgtgacaaccacagca
cctgaaccatcaaccacacagcctgccgagacatctgaatctacaggttctacagataca
gtaacatctgtgactgctggcacaactttaatatctgaatcgactaatcccagtccaacc
aacacagtaacatctgaatctgctgagaccacaacatcaactgaggcaacctctcaccca
ccacttactcaaccaagtggaccaccatcatcacctccaacagaaccaaccacaacatca
accataacaccaactaacttaccaactgtaagaccaaccataccatcaaccaaaccacca
actgatttgccagccacactaccaacaacaccacctgctacaccaacgactcaaacaacc
actaaaccattcacaacagcagagtcgtataagtgccaaaatggtggatatttcaatgga
tttaactgcacatgtcttgctggatttagtggaaagctttgccaatacgttgaaatggtt
gaaccagatgcactcaacaggtcagtcctggttcatgtggagatcaatcagcaatttaat
gacaaatatgacgacaaaacatcatccgaatacaaagagtttgttggaaacttcacagat
cagatgaagacatattaccagaaaaagaacatagcgaactttaaaggagtggtagtaacc
agtgtcagccgtggacgccctttagtcagattgtcagataatgctgtggaagagatgaca
ttatcaactgaagctgttgctatctacagtatcacatcaagagctgacagtattagtgtc
actcatgatgtggttttggtaattccaaacaatgccagctctgaacaacagtatctggat
gactttgaagcagttaaggaggctgtgaatgagcttgttgactgtacaggggattgtcct
tacaatgtcacagatcaacccatagtgaatacaacagaggtggatttgggatctgtatgt
gaagagttggtgaacaatccagatgttgctgaattctacgaacctgtacctgttcatgga
gtgatcacatgtgtgactatatgtaacagtctacattcacgtcctaaaacatgctacaat
aagggaacctgcagagtatacagggacgtgggacctctgtgcgagtgtcaagctgtgaat
tccacttggtacttgggcaatgactgtagattccctatacagaggactgctttctacgca
gggctaagtgtgaccctggcttttctattggtgactattggagccttgactgcacatgtg
ctgatcaacaatcacaagcaaacacagaggagagacattaaagagaagctggtgaaccag
tggtttaatgaggactttaagtggtccagatccaacagcccacttgatgcatataatgct
ggaggttacagaaatccctcattcccacaagaagactctgccagccacaggaaggatcca
ggtgattacagacgacctgttgacaacagactgcccagctcatcagtgagcatgttcccc
tctttgcaaacagcacccagacacgatactccactttctaatgggaatgtggctctgccc
ctcagagacctctcatccaacctgccaatgaggatcagcagacctaggatcaggacatcc
tgggatgcctga
DBGET
integrated database retrieval system
