Lates calcarifer (barramundi perch): 108895250
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Entry
108895250 CDS
T04895
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895250 (sox19b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108895250 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108895250
NCBI-ProteinID:
XP_018549454
UniProt:
A0A4W6DMW3
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Position
LG14:complement(127953..134028)
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AA seq
307 aa
AA seq
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MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGNMGSNGNSHPSSKTACAPGSDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQVGKYPLSAGNLLAAAAQGQGGSPRMESYGWGPTGGYA
GMQGEALGYTQQLHRYDLSALQYPPTMTAAQTYMNGANSYSPMSYSSSPQQPSPVTMSMV
KAEPVTHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGEAGDPTTAQRGYTSVQQHYLTG
TVPLTHI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgaccggccagcccccctctcatcagacc
tcccagggaatgtcaccggtcaccggcaacatgaccgggaacatgggcagcaatggcaac
tctcacccgagctccaaaacggcgtgtgcacctggaagcgaccccatggataaagtcaag
cggcccatgaacgctttcatggtctggtcccggggacagaggcggaagatggctcaagaa
aaccccaaaatgcacaactctgagattagtaagcggctgggagcagagtggaaactcctg
accgacgccgagaagcggcccttcatcgacgaggccaaacggctccgggcagtccacatg
aaggagtacccggactacaaatacaaaccccgccgcaagacaaagcctctgctcaagaag
gacactcaggttggcaagtacccgctgtcggcggggaacctgctggcggcggcagcgcaa
ggccaagggggtagtccgaggatggagagctacggctggggccccacaggggggtacgcg
ggcatgcagggcgaggcgctcggctacacccagcagctacaccggtatgacctgtcagcg
ctccagtacccacctacaatgacggcagcacagacgtacatgaacggagccaactcatac
agccccatgtcctacagcagcagtccccagcagccgagcccagtcaccatgtccatggtg
aaagcagagccagtgacccactcgcctccaacagggacaccgaaccaccaccgggggcct
ttgcagggtgacctgagggacatgatcagcatgtatattcctggaccaggaggagaggcc
ggtgaccccacgacagcacagaggggctacaccagtgtccagcagcactacctcactgga
actgtcccactcacacacatctaa
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