Lates calcarifer (barramundi perch): 108895267
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Entry
108895267 CDS
T04895
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04261
Adrenergic signaling in cardiomyocytes
lcf04350
TGF-beta signaling pathway
lcf04382
Cornified envelope formation
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108895267
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108895267
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108895267
04114 Oocyte meiosis
108895267
09144 Cellular community - eukaryotes
04530 Tight junction
108895267
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108895267
09158 Development and regeneration
04382 Cornified envelope formation
108895267
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108895267
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895267
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895267
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108895267
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108895267
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108895267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPFR1_M
HEAT
PPP2R1A-like_HEAT
HEAT_2
PIK3R4-like_middle
RELCH_N
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
RELCH_C
HEAT_EZ
PDS5
HEAT_GCN1_C
Cnd1
HEAT_GCN1
HEAT_MROH2B_C
Adaptin_N
SCD
CLASP_N
HEAT_GCN1_C_2
TPR_DNAAF5
M11L
HEAT_ECM29
ARM_ARMC5
SOV1_N
Motif
Other DBs
NCBI-GeneID:
108895267
NCBI-ProteinID:
XP_018549484
UniProt:
A0AAJ7Q8H3
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All DBs
Position
LG21:complement(11604877..11618425)
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
ETLVMPTLRQAAEDKSWRVRYMVADKFSELQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDNREQIIMTHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNTLCMAWLIDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPVVLKMSNDQVANVRFNV
AKSLQKIGPVLDSNALQTEVKPVLEKLASDTDMDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctgatggagacgactctctttaccctatcgccgttctcattgatgaactg
cgaaatgaggacgttcagttacgactgaacagcatcaagaagctgtcaacaattgctctg
gcccttggagtggagaggacccgcactgagctccttcccttcctcacagacaccatctat
gatgaagatgaagtgctcttggccttggctgagcagcttggcaatttcactatgttggta
ggagggccggagtatgtgcactgtctcctgcctcctctcgagagcctcgctacagtggaa
gaaacagtagtcagagacaaagctgtggagtcgctgcggaagatctctcaggagcactct
ccagttgacctggaagtccactttgagcctttggtcaagcggctggccagtggtgactgg
ttcacttctcgcacatctgcctgcggcctctttagtgtctgttatccccgtgtctccagc
actgtcaaggctgagatccgccagcatttccgcaccttgtgttcagatgacactcccatg
gtgcgtcgtgctgcagcatctaagctgggggagtttgccaaagtgttggagcttgattat
gtaaaaagtgacattatttccctcttcactgctctggcctctgacgagcaggactcagtg
cggctgcttgcagtggaggcttgtgtcagcatagccactctgctgcctcaagaggacctg
gagaccttggtgatgccaaccctgcgccaggctgcagaggacaaatcctggagggtccgc
tacatggtggctgacaagttctctgagctccagaaagcagtggggccagagatcaccaag
aacgatcttgtcccagccttccagaatctcctgaaggactgtgaagctgaggtccgtgct
gctgcagccaacaaagtgaaagaattctgtgagaacctcccagaggataatcgtgagcaa
atcatcatgactcacattctgccctgcgtcaaggaacttgtttcagacaccaaccagcat
gtgaagtcagccctggcctcagtcattatgggcctttcgaccatcctgggcaaggacaac
acaatagagcacttactgcctctcttcctggctcagctcaaggacgagtgccctgaggtg
cgtctcaacatcatctccaacctagactgtgtgaacgaggtgattggcatccgtcagctc
tcccagtctctgctgccggccattgtggagctggcagaggatgcaaagtggagggttcgc
cttgctataatagagtacatgcccctgttggcaggacagctgggagtggaattcttcgac
gagaagctcaacaccctctgtatggcctggcttattgaccacgtgtatgccatccgtgag
gcggccacctgtaatctaatgaagctggtggaaaagtttggtgccgagtgggctcagaac
accattgtacccaaagtgctgggcatggccaacgaccccaattacctccacaggatgacc
actctgttctgtatcaatgctttgtcagaggcatgtggccaggagatcaccactaagcac
atgctaccagtggtcctcaagatgtccaatgaccaggtggccaacgtacgcttcaatgtg
gccaagtcccttcagaagattggccccgtccttgacagcaatgcccttcaaacagaggtg
aagccagtgctggagaagctggcctcagacacagacatggatgtcaagtactttgcccag
gaggccatcagtgttctggccctagcataa
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