Lates calcarifer (barramundi perch): 108895281
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Entry
108895281 CDS
T04895
Name
(RefSeq) thrombopoietin receptor isoform X1
KO
K05082
thrombopoietin receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108895281
04060 Cytokine-cytokine receptor interaction
108895281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108895281
04090 CD molecules [BR:
lcf04090
]
108895281
Cytokine receptors [BR:
lcf04050
]
Interleukin receptor families
Prolactin receptor family
108895281
CD molecules [BR:
lcf04090
]
Proteins
108895281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EpoR_lig-bind
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
108895281
NCBI-ProteinID:
XP_018549512
UniProt:
A0A4W6FPG1
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Position
LG17:21777744..21786745
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AA seq
643 aa
AA seq
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MISPSTMNWPWRWEMLLISVLIQGGFVPGIYCKNGTVSHLSREEVLLLKDEEDPKCFTRT
GEDFTCFFEAADSRTYDWKVNIHPSPPIRCDISVQSPEEGTFLHICSFPDTDVQLFMDIH
VEVVEHNTNTTLYNRIVNVEDQFLVAPPFNVSLHQNGKIGQLLVLWHTEVPTYCAEMYKI
RYSSKGLGEKTKEVGNIHGDVLDSLVPGEETEVQVTVKCAFETTAGHWSSWSHPVRAMVP
QSADDVSIMCYTSNLQNITCQWNGSRYGVEKECKPFYKIGLSEEWTECLVHENFTDLFHF
NGDESGKFRVKLNCTGTPLSRTFYTQDFTSITIIKTSPPCHLRRAPNTDKLCLEWEAPLP
SLGAHLQYEVGYRTSEDEAWMTAFSEGPKTATCLEASMGRKYNVKVRTKPDGSIYSGHWS
AWSDVLTCQTTTDIGGLLLVCIPVLMSVTAVILLSMYHNKLKQYFWPPVPNPDKVLQSFL
TEISRQKWDPPLRSKLYSEETTTSVVEIMSEDDVSELGKPLEEFTQLLSPGETISSGEQV
DGSPGTTVFPDYVTLNKDSVILCPKGNNYMNEKAVEKGVPGVDDELLQAYQCSCTDGSVC
VPPCLGSDFLNLSYMHLAEAADRFDCKVTPARGPGNLYTNLPC
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatatctccttctaccatgaattggccctggagatgggagatgcttcttattagtgtg
ttgattcaagggggttttgtgcctgggatatattgcaagaatggaactgtcagtcatctg
tcaagggaagaggttttactcttgaaggatgaggaggatccaaaatgtttcacccggaca
ggagaggatttcacctgtttctttgaggctgcagacagcaggacgtatgattggaaggtt
aacatacatccaagcccgccaattaggtgtgatatctctgtccagagtccagaagaagga
actttcctccacatctgctcatttcctgacacagatgttcagttgtttatggacatacat
gttgaagttgtggagcataataccaacaccaccctctacaaccggattgtcaatgtggag
gatcaatttcttgtggctccccctttcaatgtgtctttacaccaaaatggcaaaataggc
cagctgctggttttatggcacacagaggtaccaacatactgtgcagagatgtataagatt
cgatactcctccaaggggcttggagagaagactaaagaggtagggaacatacatggagat
gtactagattctctggtaccaggggaggagactgaggtccaggtcactgtcaaatgtgcc
tttgaaacaactgcaggacactggagcagctggtcacaccctgtgcgagccatggttccc
caaagtgcagatgatgtttcaataatgtgctacacctctaacctgcaaaacatcacctgt
cagtggaatgggagcagatatggtgtggaaaaagagtgcaaacccttctacaagataggt
ctcagtgaagaatggaccgaatgcctggttcatgagaattttactgacctgtttcacttc
aatggagatgagtccggaaaattcagggtcaagctcaactgcactggaactccactcagc
agaaccttctatactcaagatttcacttctatcacgatcatcaagacatccccaccatgt
catctgagaagagcaccgaacacagacaagttgtgcttggaatgggaagctcctcttcca
tctctgggggctcacctgcagtatgaagttggctaccggaccagcgaggatgaagcgtgg
atgacagcattctcagagggaccaaagactgccacttgtctagaggcttcaatggggagg
aagtacaacgttaaggtccgaacaaaacctgatgggtccatttactcaggccactggagt
gcctggtcagatgtgctcacttgtcaaaccaccactgacataggtggcttgctcctcgtg
tgtattcctgtcctgatgtcagtaactgctgtcatcctcctttccatgtaccacaataaa
ctcaagcagtatttttggccaccggtgcccaaccctgacaaagtcctgcaaagctttctg
actgagatcagcagacagaaatgggatcctcctctgagatcaaagctgtattccgaggaa
accactacatctgtcgtggagataatgtctgaagacgatgtttctgaactggggaagcca
ttggaggaatttacccagctgctgtcaccaggggaaaccatctccagtggagaacaggta
gatgggagccctgggactacagtatttccagactatgtaactctgaacaaagacagtgtt
attctttgcccaaaaggaaacaattatatgaatgagaaggctgtagagaaaggagtccct
ggggtggatgatgagctactccaagcatatcagtgttcctgcaccgatggttcagtctgt
gtcccaccttgcttaggaagtgactttcttaacctttcctacatgcatctggctgaggct
gcagacagatttgactgcaaggtcactcctgcaaggggaccaggcaacctctatactaat
ttaccctgctag
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