Lates calcarifer (barramundi perch): 108895327
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Entry
108895327 CDS
T04895
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 2 isoform X1
KO
K14169
cytoplasmic tRNA 2-thiolation protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
108895327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108895327
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
108895327
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTU2
Motif
Other DBs
NCBI-GeneID:
108895327
NCBI-ProteinID:
XP_018549582
UniProt:
A0A4W6DTD7
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Position
LG16_LG22:complement(21745700..21756012)
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AA seq
503 aa
AA seq
DB search
MCQVDEDYQDGLERAEVPSVSKKCVKCKEASAAVVIRAGDTYCRGCFKEYFIHKFRAMLG
KNRIIFPGEKVLLAVSGGPSSCSMLSQVQEGLSQNAHKKLRFLPGIVYIDEGGAVGQSVE
ERQRTVAELQAVFKATGFPFHMVPLEEVLDLPSSVVVMAPSPSEPPASAYKAAVDHFIQS
DSSGCLTPQYQEQTLLPEVQESRTQVLQQLIGSAKTLTARQDLLNTLRQHLLVHTARTKG
YSKLMLGDNCTRLAVKLLTSLSLGRGAQLAQDTGFSDSRYGDIILVRPMRDYSAKEIAYY
NYMFNVTSVFIPSLDTKTTDKASIQRLTESFVTKLQADFPSTVSTIYRTSEKLQTACRSS
CTADHPDRCLLCMCALDTAVENASAFQATLTSEQLSQSKSLGATRTEIPRQIRAPVEQCC
SSGGGEDCGRAETGGDCCSSAKEPETIDLKSLLCYSCQLTIKDMASVEHLPQYILSEAQK
RQRRYQMREEISEFLLDDGDEGD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaggtggatgaggactaccaggatggactggagcgcgcggaggtgcccagtgtc
tccaagaaatgtgtcaaatgcaaagaggcgagtgcagctgtggtcatcagagcaggagat
acatactgcaggggctgttttaaggaatacttcattcacaagttcagagctatgctgggc
aaaaacaggatcattttccctggagagaaggtgctgttagctgtatctggagggccttcg
tcctgttcaatgctcagtcaagttcaagagggtctgagtcagaatgctcacaagaagttg
agattcttaccaggcattgtctacattgatgagggtggtgctgtaggtcagtctgtggag
gagagacagaggacagtagctgagctacaggctgtgttcaaagctactggttttcccttt
cacatggtgcctctggaagaggttctggaccttcccagttcagttgtggtgatggcccca
tcaccttcagagccaccggccagcgcctacaaagcagctgtggatcacttcattcagagt
gacagcagtggctgtttgacaccacagtaccaggagcaaacattactaccagaggttcag
gagtcccgcacacaggtcctgcagcagctgattggctcagctaagacactaacagccaga
caagacctgctaaacacgttaaggcagcatctgctggtgcacacagctcgtaccaagggc
tacagtaaactgatgctaggagacaactgcaccagactggcagttaaactgctcaccagt
ttatcactgggcagaggagcacagctggctcaggacacgggtttctcagactccaggtat
ggtgacataatattggtgaggccaatgagggactactcagccaaagaaatagcttactac
aactatatgttcaacgtgacctctgttttcataccaagcctcgacaccaagacaacagat
aaagccagcatccagcgtctgacagagagctttgtcactaaacttcaggcagacttccct
tccactgtcagcactatctacaggaccagtgagaagctgcagactgcatgtaggagctcc
tgcactgctgaccaccctgacaggtgtctgctctgtatgtgtgccctggatactgctgtt
gagaacgcttcagcctttcaggccacgctgacctcagagcagctctcccagtctaaatct
ctaggagccactaggactgagatcccaagacagatccgagctccagtggagcagtgctgt
tcctctggaggaggagaggattgtgggagagcagagactggtggagactgctgttcttct
gccaaggaaccagagacaatcgacctgaagagcctgctgtgttacagctgtcagctgacc
atcaaagacatggcatcagtggaacatcttcctcagtacatcctgtcagaagctcagaag
aggcaaagaaggtatcagatgagagaggagatcagtgagttcctgttggatgacggtgat
gaaggcgattag
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