KEGG   Lates calcarifer (barramundi perch): 108895335
Entry
108895335         CDS       T04895                                 
Name
(RefSeq) ras-related protein ORAB-1
  KO
K07874  Ras-related protein Rab-1A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108895335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108895335
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108895335
   04031 GTP-binding proteins [BR:lcf04031]
    108895335
Membrane trafficking [BR:lcf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    108895335
 Autophagy
  Other autophagy associated proteins
    108895335
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108895335
  Exosomal proteins of other body fluids (saliva and urine)
   108895335
  Exosomal proteins of colorectal cancer cells
   108895335
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    108895335
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA SRPRB FeoB_N AAA AAA_7 ABC_tran PduV-EutP AAA_16 LANC_like AAA_29 Septin AAA_22 AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 108895335
NCBI-ProteinID: XP_018549589
UniProt: A0A4W6DPN4
LinkDB
Position
LG16_LG22:complement(22133725..22145125)
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GGEKPNVKLTPGTTVKPSSGGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatccagaatatgattatttattcaagctcctcctgattggtgactctggtgttgga
aagtcttgccttcttctccgatttgcagatgacacatacacagaaagttacattagcacg
attggtgtggacttcaaaatacgaaccatagaactagatggaaagacaattaaacttcag
atttgggatacagcgggtcaggagaggtttcgcacaatcacgtccagctactacagaggt
gctcatggtatcattgtagtgtatgatgttacagaccaggagtccttcaacaatgtcaaa
cagtggctacaggagattgaccgctatgcaagtgaaaatgtcaacaagctgttggtcggg
aacaagtgtgaccttacgacaaaaaaagtggtggattacacaacagcaaaggagtttgca
gactctctgggcattccctttttggaaacaagcgccaagaatgccaccaatgtggagcaa
gccttcatgacaatggctgctgaaatcaaaaagaggatgggccctggggccacagctgga
ggaggggagaagcccaatgtgaagctgacccctggcactactgtcaagccttcatcagga
ggatgctgctga

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