Lates calcarifer (barramundi perch): 108895335
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Entry
108895335 CDS
T04895
Name
(RefSeq) ras-related protein ORAB-1
KO
K07874
Ras-related protein Rab-1A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108895335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108895335
04031 GTP-binding proteins [BR:
lcf04031
]
108895335
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
108895335
Autophagy
Other autophagy associated proteins
108895335
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108895335
Exosomal proteins of other body fluids (saliva and urine)
108895335
Exosomal proteins of colorectal cancer cells
108895335
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
108895335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SRPRB
FeoB_N
AAA
AAA_7
ABC_tran
PduV-EutP
AAA_16
LANC_like
AAA_29
Septin
AAA_22
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
108895335
NCBI-ProteinID:
XP_018549589
UniProt:
A0A4W6DPN4
LinkDB
All DBs
Position
LG16_LG22:complement(22133725..22145125)
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GGEKPNVKLTPGTTVKPSSGGCC
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaatatgattatttattcaagctcctcctgattggtgactctggtgttgga
aagtcttgccttcttctccgatttgcagatgacacatacacagaaagttacattagcacg
attggtgtggacttcaaaatacgaaccatagaactagatggaaagacaattaaacttcag
atttgggatacagcgggtcaggagaggtttcgcacaatcacgtccagctactacagaggt
gctcatggtatcattgtagtgtatgatgttacagaccaggagtccttcaacaatgtcaaa
cagtggctacaggagattgaccgctatgcaagtgaaaatgtcaacaagctgttggtcggg
aacaagtgtgaccttacgacaaaaaaagtggtggattacacaacagcaaaggagtttgca
gactctctgggcattccctttttggaaacaagcgccaagaatgccaccaatgtggagcaa
gccttcatgacaatggctgctgaaatcaaaaagaggatgggccctggggccacagctgga
ggaggggagaagcccaatgtgaagctgacccctggcactactgtcaagccttcatcagga
ggatgctgctga
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integrated database retrieval system