Lates calcarifer (barramundi perch): 108895348
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Entry
108895348 CDS
T04895
Name
(RefSeq) ELAV-like protein 2 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895348
03041 Spliceosome [BR:
lcf03041
]
108895348
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108895348
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108895348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
BRX_assoc
RRM_2
Motif
Other DBs
NCBI-GeneID:
108895348
NCBI-ProteinID:
XP_018549614
UniProt:
A0A4W6DTN5
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Position
LG14:complement(10272877..10419833)
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AA seq
389 aa
AA seq
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MAVRLCDVASLLRSGSWAPEPWTGQVIAAMETQLSNGPTCNNTSNGPSTISNNCSSPVES
GSIEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPK
DAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRI
ITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANNPSQKTS
QALLSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMAIDGVTSLAGINIPG
HAGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEA
AVAIASLNGYRLGDRVLQVSFKTNKTHKA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagactgtgcgatgtggcttctctgcttagaagtggttcgtgggcgcctgag
ccttggactgggcaggtaattgctgccatggaaacacagctgtccaatggaccaacttgc
aacaacacaagcaacggtccctcaacaatctcaaacaactgctcctcacctgtagaatca
gggagcatagaggacagtaaaactaacttgatagtcaactatctgcctcagaacatgacc
caagaggagctgaagagtttgtttgggagcatcggagaaattgagtcctgtaaactagtt
cgagacaaaataacagggcagagcctaggctatggatttgtgaattacgtggacccgaag
gatgcagagaaagccatcaatactttaaatggcttgagacttcagaccaaaaccatcaag
gtttcctatgcgcgtccaagttctgcctccatcagagatgcaaatttgtacgtcagtggc
ttgccaaagaccatgactcagaaagaactggagcagctcttctctcagtatggacgcatc
attacctcacgcattctggtggaccaggtgactggcgtttccagaggggttggctttatt
cgttttgaccggcgagttgaggctgaggaggccatcaagggtctcaactgtcagaagccg
cctggtgccactgaaccaattacagtcaagtttgcaaacaacccaagccagaagaccagc
caggcgctgctgtcccagctgtatcagtcacccaatcgaaggtacccaggacccctcgca
cagcaggcacaacgcttcaggttggacaatctgctgaatatggcctatggagtcaaaagc
aggttctcccccatggccattgacggggtgaccagcttggctggcatcaacatcccaggg
cacgcaggcactggctggtgtatcttcgtctacaacctggctccagatgcagacgaaagc
atcctctggcagatgtttgggccgtttggtgccgtcacaaacgtcaaagttattcgcgac
ttcaacacaaacaagtgcaaaggatttggttttgtcaccatgactaactacgacgaggca
gccgtggccatcgccagcttgaatggataccgcctcggggacagagtgctgcaagtctcg
ttcaaaaccaacaaaacacacaaagcctaa
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