Lates calcarifer (barramundi perch): 108895411
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Entry
108895411 CDS
T04895
Name
(RefSeq) septin-6 isoform X1
KO
K16939
septin 6/8/11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108895411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108895411
04812 Cytoskeleton proteins [BR:
lcf04812
]
108895411
04147 Exosome [BR:
lcf04147
]
108895411
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
108895411
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
108895411
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108895411
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
ATG14
AAA_16
AAA_22
Roc
DUF3080
AAA_29
UBA_NBR1_C
AAA_7
Ras
DUF4478
TPR_MLP1_2
Fzo_mitofusin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108895411
NCBI-ProteinID:
XP_018549736
UniProt:
A0AAJ7Q8K2
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All DBs
Position
LG8:16635527..16738551
Genome browser
AA seq
436 aa
AA seq
DB search
MFKSVKTWFHKKGEGARAVPLAGHVGFDSMPDQLVNKSVNHGFCFNILCVGETGLGKSTL
MDTLFNTKFEGEPTQHNQPGVTLKSNTYELQESNVRLKLTVVNTVGFGDQINKEDSYKSI
VEFIDAQFEAYLQEELKIKRTLHSYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVN
IIPIIAKSDAISKSELAKFKIKITSELVSNGVQIYQFPTDDESVAEINSTMNSHLPFAVV
GSTEEVKIGNKMVKARQYPWGTVQVENENHCDFVKLREMLIRVNMEDLREQTHTRHYELY
RRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFMGELQKKEEEMRQMFVQRVKEKEAELK
EAEKELHEKFDRLKKLHQDEKKKLEEKKKSLDDELNTFKQKKTAAELLQNQAQQAGGSTT
LKRDKERKNNPWLCTE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagtgtgaagacatggtttcataaaaagggtgaaggtgctcgtgctgtccct
ctggcaggccatgtcggcttcgacagcatgcctgaccagctggtcaacaagtctgtcaac
cacggattctgctttaacatcctctgtgttggtgagacgggactggggaagtccaccctg
atggacacgttgtttaacaccaagtttgagggtgagcccacccagcacaaccagccggga
gtcacgctcaaatccaacacctatgaactccaggagagtaatgtgcgcctcaaactcact
gttgtcaacaccgtgggcttcggagaccagatcaataaagaagacagctacaagtccatt
gtggagtttattgatgcccagtttgaagcatatctacaggaggaactgaaaatcaagcgc
acgctacacagctaccacgacacccgcatccatgcatgcctgtacttcatcgctcccacg
ggacactcgctcaaatccctggacttggtgaccatgaagaaacttgatagcaaggtcaat
attatcccaatcattgccaaatcagatgccatctccaagagcgagctggccaagttcaaa
atcaaaataaccagtgagctggtcagcaacggagtgcagatctaccagttccccactgat
gacgagtctgtggcagagatcaactccaccatgaatagccatttgccgtttgctgtggtg
gggagcacagaggaagtgaagattgggaacaagatggtgaaggcccggcagtacccctgg
gggacggtgcaggtggaaaacgagaatcactgtgactttgtcaaactgcgagaaatgctg
atcagagtgaacatggaggacctgcgagagcagactcacacacgccattatgagctctac
cgccgctgcaaactggaggagatgggctttaaggacacagaccctgacagcaagcccttc
agtctgcaggagacgtatgaagctaagaggaacgagttcatgggtgagctgcagaagaaa
gaagaagaaatgaggcaaatgtttgtccaaagagtcaaagagaaggaagccgagcttaaa
gaagcagagaaagagctgcacgagaagtttgaccgtctgaagaaactccaccaggatgag
aaaaagaaactggaggaaaagaagaagtccctggacgacgagctcaacacgttcaaacag
aaaaagactgcagcagagctcttgcagaaccaagctcagcaggcagggggctctaccaca
ctcaagagggacaaagagaggaaaaataatccctggctctgcactgagtag
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