Lates calcarifer (barramundi perch): 108895446
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Entry
108895446 CDS
T04895
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108895446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895446
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
AP-3 complex
108895446
Endosome - Golgi transport
108895446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
INTS1_R4
HEAT_GCN1
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
108895446
NCBI-ProteinID:
XP_050928989
UniProt:
A0AAJ8B9R8
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Position
LG9:18372196..18490817
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AA seq
1116 aa
AA seq
DB search
MDVGFSLRSEAAGVMRTALVSAENLQLTLKTELSQEEQALTHTNSSPKETNKAGNEDLKE
MLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQ
QDLALLSISTFQRALKDPNQFIRASALRVLSSIRVPIIVPIMMLAIKEAAADLSPYVRKT
SAHAIQKLFSLDPDQKEQLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKL
CNLLVDVEEWGQVVIISMLTRYARTQFTSPWKEGAVFDENNEKTFYDSDSEEKKGQIEAK
PYIMDPDHRLLLRNTKPLLQSRNTAVVMSVAQLYWHLAPKHEVSIVTKSLVRLLRSHREV
QYIVLQNIATMSIQRKGMFEPFMKSFYVRSTDATHIKTLKLEILTNLANEANISTILREF
QTYVKSQDKAFAAATIQAIGRCATNISEVTDTCLNGLVLLLSNRDETVVAESVVVIKKLL
QTQPTQHSEIIKHMAKLFDNITVPMARASILWLMGEYCERVPKIAPDVLRKMAKTFTIEE
DIVKLQTVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPSEKNGA
LNKYARRILLAPKPAPVLESAFKDRDRYQLGTLSHSLNIKATGYQELSDWPAVAPDQSVR
NVEVIEPVKEWAPLVGKAKQTKSDDKFYSDDEDEKEEEGSDSSGSEDSSSSSSSSSSSEE
SGSESEEESSEESEKTSSDSGKSSSGSEESSSESESDKNKKKKKTKKAPQKKSKPTAADS
DSDENGNGPVAHASSSSAETSSGSETDSEDDSDSDSPTVQKKKSDVKSKAKVEVKSKREV
SLLDLDDFSPAPTNVPKSAVLSSSLLSDLEGLSLSNVSSTMQVTTPSFGPVKTYELLHHM
TGKGLSAKYHFPRQPCLYQPSMVAVQVILTNGSDHSLEEIHIGDRNPASLNIHCFNTIER
LEPEASVTVSMGIDFSDSTQAANFQLCTKEDQFNVSIQPAVGELLMPSSMTEQDFCKEQG
KLLGMNETSGTITMATANASSQAISKQVLSVANVGVVSSSQNNFHRFAGQTVSSGALVLV
SLEVKESSSALLTINTEKSVMASMLLRDLKQALAQA
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggtttctctttgcgttcggaggcagcaggagttatgaggacagcgctggtg
tctgctgagaacttacagctcactctgaagaccgagctgagtcaggaagaacaggccctc
acacacaccaacagtagccccaaggagacaaacaaagccgggaatgaagaccttaaagag
atgttggagagcaacaaagagtcgctcaaactggaggccatgaaaagggtcgtcgggctg
attgccaaagggaaaaatgcatctgagctatttcctgctgtggtgaagaacgttgcaagt
aagaacatcgagcttaagaagctggtgtatgtctacctggtgaggtatgcagaggagcag
caggacctggctctactatccatcagcaccttccagcgggccctgaaggacccaaaccag
ttcatccgggccagtgcactgagggttttgtccagtatccgtgtccccataattgtcccc
atcatgatgctggccatcaaggaggcagcagctgacctgtccccatatgtcaggaagact
tctgcccatgctatccagaagctcttcagtctggatccagaccagaaggagcagctgatc
gaagtgatagagaaactattgaaagataaaagcacactggtggctggcagtgtggtgatg
gccttcgaagaagtctgtccagatcgcattgacctgatccataagaactacagaaagctg
tgtaacctgctggtggatgtggaggagtggggccaggtggtcatcatctccatgctgacg
cgctatgccaggacgcagttcaccagtccctggaaggagggtgctgtgtttgatgagaac
aatgagaagacgttctatgactctgactctgaggagaaaaaaggccagattgaggccaag
ccttacatcatggatccagatcacagactgctgctcaggaacactaaacctctactgcag
agcaggaacactgctgtggtgatgtctgttgcccagctctactggcatctggcccctaaa
catgaagttagcattgtcactaagtcactggttcgactactaagaagccacagagaggtg
cagtacattgtgcttcagaatatcgccacaatgtccattcagagaaaggggatgtttgag
cccttcatgaagagtttctatgtcagatctacagatgccacacatatcaaaacactgaag
ttggagatcctgaccaaccttgccaatgaagccaacatctctactatcctgagggaattt
cagacttacgtgaagagtcaggacaaggcatttgcggcagccacgattcaggccatcggc
agatgtgccaccaacatctctgaggtgacagacacctgtctcaacgggctggtgctgctc
ctttccaacagagatgaaactgtggtggctgagagtgttgttgtgatcaaaaagttgctt
cagactcagcccacccagcacagtgagatcatcaaacacatggccaagctcttcgacaac
atcactgttcccatggcccgagcaagcatcctgtggctgatgggagagtactgcgagagg
gtaccaaagattgcacctgatgttcttcggaagatggcaaagactttcacgatagaggag
gacattgtcaagctgcagacagtcaacctagcagccaaactttacctgaccaactctaag
cagaccaagctgctgacccagtacatcctgaacctcggcaaatacgaccagaactatgat
atcagggaccgaacacgctttataagacagctcatagtccccagcgagaagaatggagcc
ctcaacaagtatgctcgacgcatcttactggcccccaaaccagctccggtgcttgagtcc
gccttcaaagatcgagaccgttaccaactgggcactctctcccacagtctcaacattaaa
gctaccggataccaggaactctcggactggccggctgttgctcctgaccagtctgtgagg
aacgtggaggtcattgagccagtgaaagagtgggcaccattagttgggaaggccaagcaa
accaaatctgatgacaagttctactcagatgacgaagatgagaaagaagaggaaggatct
gatagcagtggcagtgaagatagcagcagcagcagcagcagcagcagcagcagtgaagag
tcaggcagtgagagcgaggaggaaagcagtgaagagtcagaaaagacctccagtgattct
ggaaagagttcaagtggatctgaagagagctccagtgaatcagaatcagacaaaaacaag
aagaagaaaaagaccaagaaggcgccgcagaagaaaagcaagccaactgctgctgacagt
gactcagatgaaaatggtaatggacctgtagcccatgccagcagctcatcagctgaaacc
tcctctggctcagagacagactccgaagacgactctgattcagactctcccacagtacaa
aagaagaaaagtgatgtgaaatccaaagccaaggtggaagtgaagtccaagagggaagtc
tctttactggatctagatgacttttccccagcacctacaaatgtaccaaagtctgcagtc
ctctcttcgagcctgttgtccgacctcgaaggcctgtctctctccaatgtctcctccacc
atgcaggtcactactccatctttcggccctgtgaaaacctacgagctgcttcaccatatg
acaggaaaaggtctctctgccaaatatcatttccccaggcagccatgtctgtaccagccc
agtatggtggcagtacaggtcatactgaccaatggctcggatcacagtttggaggagatc
catataggagaccgaaaccctgcgagcctgaacatccactgctttaacactatcgagcgc
ctggagccagaggcctcggtgacagtttccatgggtattgacttcagcgactcgacacaa
gcagccaacttccagttgtgcaccaaggaggaccaatttaatgtgtccatccagcctgct
gtaggagagctattaatgcccagcagcatgacagaacaggacttctgcaaagagcaaggt
aagctcttgggcatgaatgagacctcgggaaccatcaccatggcaacagcaaacgcctct
agccaggccatcagcaagcaggtcctgtctgtggccaatgtaggagtggtttcctccagc
cagaacaacttccacaggtttgccgggcagacggtcagcagcggagctctggtcttggtg
tcactggaggtcaaggagtcctcctctgccctgctcacgatcaacacagaaaagagcgtc
atggcgtccatgttgctgcgagacctcaaacaggccctcgcccaagcatag
DBGET
integrated database retrieval system
