Lates calcarifer (barramundi perch): 108895450
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Entry
108895450 CDS
T04895
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108895450
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
108895450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
108895450
NCBI-ProteinID:
XP_018549799
UniProt:
A0AAJ7Q8X3
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Position
LG9:17785256..17799963
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AA seq
468 aa
AA seq
DB search
MSGIPGTAVVQVTNLSSAVSSEQMRTLFGFLGDIEELRLYPPDNAPLSFSSKVCYIKYRD
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPVPSLIPGGGLLPIPT
PAPLQNLNLPLVNRMSASLDPTVSVHSQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTAE
QLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARALTFNGVMFGDRPLKVNHSN
NAIVKPPELTPQAAAKELESVMKRVREAQSTIAAAIEPDTKTRSSSRSRRSRRSPSRSRS
RSHSRTRRKRSRSKHRTSQKSWPRSNSHSSRSGHRRRSRSRDRRHSRSRSRGHRRRSKDR
SRSPRRKARSPSLKRGKKDKRRGRSRDRKDRSTSRKRGRKDEDRIKSKAKPMKVERDYDR
EEKEDFESDREGSATPSEDMTPSPCVQHNGSYKTHNEEEASMGADSTK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggataccaggaaccgctgtcgtccaagtcaccaacctgtcctcggccgtgagc
agtgagcagatgcgcactctgtttggtttcctgggagacatcgaggagctgcggctctac
ccgcccgacaatgcccctctgtctttctcgtccaaagtgtgttatataaagtaccgagac
ccctccagtgttggtgtggcgcaacatctcaccaatactgtttttattgacagagccttg
atagtagtgccatgtgctgaagggaaaatcccagaagaggccaaggccttgtcacttttg
gcacctgctgctccagtgcccagtctgattcctggaggggggctgctaccaattcctact
ccagctccactacagaatctgaacctcccattagtgaatcggatgtcagccagtcttgac
cccacagtgtcggtgcactcccagccccccctcatgggaaatgtggatccctcaaaaatc
gatgaaatcaggaggaccgtctatgtcggcaacttaaactcacagaccaccactgcagag
cagttgttggagttcttcaagcaagtgggagatgttaagtttgtgcgaatggctggagat
gagactcagccgacgcgtttcgccttcgtagagtttgtcgagcaggagtcagtcgccaga
gccctgaccttcaatggagtcatgtttggggacagacccctgaaggttaatcattccaat
aatgccatagtaaaacctccagagctgacgcctcaggctgctgctaaggagctagaaagt
gtgatgaagagggtgagggaggcccagtctaccattgctgctgccatagaaccagacaca
aagacgcgatcttccagtcggtccagaaggtcacgtcggtcaccctcgcggtctcgctct
cgatcacactcacgaacacgcaggaaaagatcccgttcgaaacacagaacatcgcagaag
tcgtggcccaggagcaactctcacagttctcgaagcggccacaggaggcgctctcgctcc
agagacagaagacacagtcgaagtcgctcgaggggccacaggaggaggagtaaggatcga
tccaggagccctcggaggaaagccaggtcaccctcactaaaacgaggtaagaaagacaag
aggagggggcgcagcagggacagaaaggaccgctccacatccaggaagaggggccgcaaa
gacgaggacaggataaagagcaaggccaagccaatgaaggtggaaagggactatgacaga
gaagaaaaggaagactttgaaagtgacagagaaggctcagccacacccagcgaggacatg
acgccatcaccctgcgtccagcacaatggcagctacaagactcataatgaggaggaggcc
tctatgggcgcagacagcactaagtga
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