Lates calcarifer (barramundi perch): 108895453
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Entry
108895453 CDS
T04895
Name
(RefSeq) homer protein homolog 1 isoform X3
KO
K15010
homer
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
108895453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108895453
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108895453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
GAS
DMPK_coil
DnaX_C
CALCOCO1
ZapB
CCDC93_CC
MAD
ATG16
DAHL
FPP
BLOC1_2
Fmp27_WPPW
DUF4763
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
108895453
NCBI-ProteinID:
XP_018549803
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All DBs
Position
LG9:18203858..18226743
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AA seq
378 aa
AA seq
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MYRGLREQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFFDSTRNVYRIISLDGSKAI
INSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSESHLVKFADKFAEFKEAARLAKEK
SQEKMELTSTPSQGGAVKRNVLSVNKPGKKKESAPGDLQSPLTSESINGTDDERVTPDTP
QHTEARAEPSQNALPFSHSSSSINKHWEVELAALKGNNAKLTAALLESTANVKQWKQQLA
AYQEEAERLHKRVTELECVSGQTTVIKSQKTELNQTIEELELALKAKEEELERLKAEVES
ANEFQSQKDSLTQKLQDTESRNQVLEAQLSDLEQRLESSQQEREAFRKSLRSLLELLDSK
IFELTELRDTLAKLLEGS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggggtcttagagagcagcccatcttcagtacacgggcccacgtcttccagatc
gacccaaacaccaagaagaattgggttcccacaagtaaacatgctgtcacagtctcctac
ttcttcgacagtaccaggaatgtatatcgaatcatcagtctggatggatctaaggccatt
atcaacagcaccatcacccccaacatgacattcaccaagacgtcacagaaatttggccag
tgggccgacagccgggcgaacaccgtttacggcctcggcttctcatctgagagccacctg
gtcaagtttgcagataagttcgctgagttcaaggaggcagctcggttagcgaaggagaag
tctcaggagaagatggagctcaccagcactccctctcagggtggcgctgtaaaaaggaat
gtgttgtcagtcaacaaacctggtaaaaagaaggagtcagccccgggtgatctgcagtca
cctttgacctccgagagcatcaacggtacggacgacgagagagtcacaccagacacacct
caacacactgaagccagagcagagccttcccagaatgcactgcccttttcacacagttca
tccagcatcaataagcactgggaggtggagctggcggctcttaaggggaacaacgccaaa
ctgacagcagctctgctcgagtccacagccaacgtcaaacagtggaaacaacagctggcg
gcctatcaggaagaagcagagaggctacacaaacgggtgacggagctggagtgtgtgagc
ggtcaaacgacggtgatcaaatctcaaaagacagaacttaaccaaacaatagaagagctg
gagttggctttgaaggccaaagaggaggagttagagagacttaaagcagaggtggagagt
gccaatgagtttcagtctcaaaaagactccctcacacagaaactacaggacacggagtcg
aggaaccaggtgttggaggctcagctgagcgatctggagcagcgtctggagagcagccag
caggagagagaagccttccgcaagagcctgcgctcgctgctggagctgctggacagtaag
atcttcgagctgactgagctgcgggacacgctggccaagctcctggagggtagctag
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