Lates calcarifer (barramundi perch): 108895454
Help
Entry
108895454 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: junction-mediating and -regulatory protein
KO
K24045
junction-mediating and -regulatory protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895454
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108895454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
108895454
NCBI-ProteinID:
XP_018549807
UniProt:
A0AAJ7Q8R7
LinkDB
All DBs
Position
LG9:complement(18227075..18254831)
Genome browser
AA seq
923 aa
AA seq
DB search
MSFTMEDNLESGWVSVRPRIFDEKERHKFAFIVAWNDIEGKFAITCHNRTVQRRATFLDP
LLDCCPAATTSPALGASVAEKHTKSPVTTSKDEVCQAGKVRPHSFPKGKPTTKTVVGDKR
ALKAVGSQTFECVSHALGSWDIVTPKVIDIEILDPVEVQLSPDDSDPGDRENSAREDFSW
AGLYSFQDLRAAHLQLCAVNSDLEPCLPSFPEEQSGVWTVLFGAPGVSQRETEALCYQLQ
VYLGHALDTCGWKILSQVLFSESDDTEEYYESLSELRQKGYEDALERAKRRMQEVLDKHK
AMDSMVELLQVYPEEDEAYGELLEATTQLYHYLLQPFRDMRELAMLRRQQIKISLETERL
GPRRVESLRKEDEEWQKKAHAAVLSIQELTVKFFETTTRAQKALYERMRADQRKFGKSAW
AAAVERMERLQYAVSRETLQLMRAKEICLEQRKHGLKEEMQSLQGGEDAMLRLDQLEALY
YELQLQLYDIQAEVLRCEELLLTAQLQSLRRQMTERQDEVVYYDAFESPDAMKGVEDPAT
PPSPLRDEELSVLQQRTRQLEARRGRITAKKVYLKNKKEICIVNHNQKIQQRQGSLADST
SLQALQQGGEAEEDEAKRNARVSQERQTTLDRLRSLKQRYPGQVTLKSSRLRLSQAHSRR
RAGQQPNTQAASVQTDSISDLPQLSAPPPPDACSCDSVSLPTVELENLASSPPFLSLPPL
SASPSVLSLGAPPPPPPPPPPPLPPPPPPPPPPSEEQRQGEDGEKNPTGSPARQNKCESE
SPSLPLAPFSPRFFDSSQLLTARKKLRKTSSLDSSQWRRASSPMDEVLASLKRGSFHLRK
AELRVLGPDPDDDSNNILAQIRQGVRLRKVRTRPEQQQRHPKSFPHSADALTRSIHEALR
RIKEASPESESEDEGLPCTDWEN
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaccatggaagataacttggagtccgggtgggtgtccgtccgacccaggatc
tttgacgaaaaagagaggcataaatttgctttcatcgtggcctggaacgacatcgaaggg
aagttcgccataacctgccacaacagaaccgtgcagagacgggccacttttctggacccg
ctcctcgattgttgtcccgccgctactacgtctcctgccctcggtgcctccgtggcagaa
aaacatacaaaaagtccggtcacaacgagcaaagatgaagtctgccaagcgggtaaagtc
cgaccacactctttccccaaaggaaagcccacaacaaagactgttgttggggataagagg
gctttaaaagccgtgggttcacagacatttgagtgtgttagccacgcgttagggtcctgg
gatattgtgacacccaaggtaatagatattgagattctggaccccgtggaggtccagctg
tctccggatgattcagacccaggggaccgtgagaacagcgcccgggaggacttcagctgg
gccgggctgtactccttccaggacctgagggcagcacacctccagctgtgcgccgtcaac
tcggacctagagccgtgtttaccgtctttcccggaggagcagtccggagtatggacggtg
cttttcggtgctcccggggtgtcccagcgggagacggaggccctgtgctaccagctgcag
gtgtacctgggtcatgccctggacacctgcggctggaaaatcctctcacaggtgcttttc
tccgagagcgacgacacggaggagtactacgagagcctgagtgagctgagacagaaaggc
tacgaagatgcgctggagagggccaaaagacgcatgcaagaggtgttggacaaacacaaa
gccatggacagcatggtggagctgctgcaggtgtaccctgaggaggacgaggcgtatgga
gagctgctggaggcaacaactcagctataccactacctgcttcagcctttcagggacatg
agggaactggcaatgttgcgcagacagcagattaagatctctctggagacagagcgcctg
ggtcctcgtcgtgtggagagcctgaggaaggaggatgaggagtggcagaagaaggctcac
gccgccgtcctctccatacaggaactgactgttaagttctttgaaaccacaacacgagca
cagaaagctctctatgagcgtatgcgtgctgaccagaggaagtttggcaagtcagcgtgg
gctgcagcagttgaacgtatggagcggctgcagtatgctgtttccagagaaactctgcag
ctgatgagggccaaagaaatctgcctggaacagaggaaacatggcctgaaggaggagatg
cagagtctgcaaggtggggaggatgccatgctgcgtctggaccagctggaggcgctgtac
tatgagttacagctgcagctgtacgatatccaggccgaggtgctgcgctgtgaagagctg
ctgctcactgctcagctgcagagtctgcgcaggcagatgacagagcgacaggatgaggtg
gtgtattacgatgcctttgagagccctgatgccatgaagggagtagaagaccctgcaacg
ccgccatcccccctcagagatgaggagctcagcgtcctgcagcagaggacacggcagctc
gaggctcgccggggccgcatcactgccaagaaagtctacctcaaaaacaagaaggaaatc
tgtattgtcaatcacaaccagaagatacagcagcgccaaggtagcctcgctgacagcacc
tctcttcaggcactgcaacagggaggagaggctgaagaagacgaagccaaacgaaatgcc
agggtgagtcaggagaggcagacgactctggacaggcttcgcagcctcaaacagcgttat
ccaggccaggtgactctgaagtccagccggttgcgtctgagtcaggctcacagtcgcagg
agagcggggcagcagccgaacacccaggcggccagcgttcagaccgactccatctcagac
ctcccacagctctccgctcctcctccgcccgatgcctgcagctgcgacagcgtgtctcta
ccaacagttgaactcgagaatctcgcctcctcgcctcctttcctctcgctgcctcccctc
tcagcctccccatctgttctttcgctgggcgctccgcctccccctcctccccctcctcct
cccccgctcccacctccgcctcctccgccgcctcctccctcagaggagcagcggcagggt
gaggacggggagaagaatcccactggcagcccggcgcggcaaaataaatgcgagtccgaa
tcaccctcgctacccctggctccgttttccccacgattctttgacagcagccagctgctg
acggcgaggaagaagctgaggaagacttcctcgctggactcctcacagtggaggagagcg
agctcccccatggacgaagtgctggcctccctcaaacggggcagtttccacctgaggaag
gccgagctgcgggtcctgggcccggacccggacgacgacagcaacaacatcctggctcag
atcaggcagggcgtcaggctgaggaaggtacggacccggcccgagcagcagcagcgccac
cccaagagcttcccccactcggccgacgctctgacccgcagcatccacgaggctctgagg
agaatcaaagaggcttcaccggagtctgagtctgaggatgaaggccttccatgcactgac
tgggaaaactag
DBGET
integrated database retrieval system
