Lates calcarifer (barramundi perch): 108895466
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Entry
108895466 CDS
T04895
Name
(RefSeq) WD repeat-containing protein 41
KO
K23610
WD repeat-containing protein 41
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108895466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895466
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
108895466
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
108895466
NCBI-ProteinID:
XP_018549825
UniProt:
A0AAJ7VEL2
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Position
LG9:18568178..18579246
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AA seq
450 aa
AA seq
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MLRWILGGREAQSSVEKSPVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNIETGERLQELRGHSQQITAITTLTCNNGLMSHTSLITASSDRSLSLWDPDT
GNRVQTISDLQSSVKCLLVLERLCVWLSGGEELCVWNKDFQLQCHRQNHSDTGITALIEL
PKNCIAAAMDKEIMIYRLTVSTDSSMSVAEIRCLSDHQDQIRALINVNDGLFASGSHAGE
LILWDAIDWTILAYEHILWEESQTSAQAEIRMGAPKPSEMSIQHLTTNGTLILAAVGSGL
YVYSILTKTVVAYRKVAHDSNVLHTMLLSDSELMSCSEDGSVRMWEIQDLPLPAEPASAG
FFGMWNFGRSNKQTGPPSKKVMDVPNIRTLELTGDLIGHSGAVQMFVSFKENGLVTCSTD
HLLILWKNGERQSHLRSLALFQKLEENGGL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggtggatactcggtggtcgggaagcccaaagctccgtggagaaaagccctgtg
ttgtgcattggcgaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcagatgtgcctcagcagga
gatgatggccttgttttggtgtggaatattgagactggcgaaaggctgcaggagctgagg
ggccattcccagcaaataacagccataaccaccttaacctgtaataatggactcatgtcg
cacacgtccctcatcactgcctcctcagacagaagtctcagtctgtgggaccctgacaca
ggcaacagggttcagaccatttcagatcttcagtcttctgtaaagtgtttgctggtgctg
gagcgactgtgtgtgtggctctctggcggggaagaactgtgtgtgtggaacaaagacttt
cagctgcagtgtcacagacagaaccacagtgacactggaataactgcgttgatagagctg
cccaagaactgcatagcagctgctatggataaagaaataatgatttacaggcttacagtt
tctactgattcttctatgtcagtggctgaaatccgctgtctctcagaccaccaggaccag
attcgagctcttatcaatgtcaatgacgggctctttgcgagcggttcccatgcaggcgag
ttgatcttatgggatgcgattgattggaccattttggcctacgagcacatcctgtgggag
gagtcacaaaccagtgcgcaggctgaaatacggatgggggctcccaaacccagtgagatg
tccattcagcatttgaccacgaatggaacgctcatcctggcagctgtgggcagcggtctg
tatgtgtacagcattctgaccaaaacagtggtggcctacaggaaggttgcccatgactcc
aatgttttacacaccatgttgctatctgacagcgagttgatgtcctgctctgaagatggc
agcgtgaggatgtgggagatccaagacctgcctttgcctgctgagcctgcctctgcaggg
ttctttggcatgtggaattttggccggtcaaacaaacagactggtccaccgtcaaagaag
gtcatggatgtccccaacatcaggacgttggagttgacaggcgatctgatcggacactcg
ggggcggtgcagatgtttgtgagcttcaaggagaacggtctggtcacatgctcgacggac
cacctgctgattctgtggaagaacggggagagacagtcgcacctccgcagcctggcactt
ttccaaaaactggaggagaatggaggactctga
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