Lates calcarifer (barramundi perch): 108895516
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Entry
108895516 CDS
T04895
Symbol
nocta
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895516 (nocta)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
108895516 (nocta)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108895516 (nocta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
108895516
NCBI-ProteinID:
XP_018549886
UniProt:
A0A4W6DU51
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All DBs
Position
LG8:845243..855621
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AA seq
460 aa
AA seq
DB search
MNPARRCSALLNQLCVSSRGGPTARRPFSPAERSSSAGPRYSGVGGRGVGVKGTCPQGKL
SGASIAGAALVCPMGGSSSSSSSSSSSSSRLFGTLSQSLNSSPLAQPDLYAEESPDQDLA
EVDPDQLLRECEDVLQRRPARPHRDLVYPSGTAPCHHKHNPSIRIMQWNILAQALGEGKD
GFIRCPLEALNWQERKYLILEEILTYRPDILCLQEVDHYYDTFQPIMASLGYHGSFLAKP
WSPCLDVEQNNGPDGCALFFRRSRFSLQATAHLRLSAMMLPTNQVAIVQTLHCRVTGQRL
CVAVTHLKARSGWERLRSAQGADLLQSLRSITSRGGGQSEAPSAVLPLVVCGDFNAEPSE
DVYRRFSSSPLGLDSAYKLLSSDRQTEPAYTTWKIRPSGESCSTLDYIWYTHDALSVDCL
LDIPTEEQIGPGRLPSYHYPSDHLSLLCDVSFRDEPHRLM
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagcccgtcgctgttcggcgttattgaatcagttgtgcgtgtcttcccggggt
ggaccgacagcccggagaccgttttcaccggcggaacgctcttcctcggcgggaccacgg
tactccggtgtcggaggaagaggagtgggagtcaaagggacctgtccccaggggaagctg
agtggagcatccatcgctggggcagcactagtttgtccaatgggtggcagcagcagcagc
agcagcagcagcagcagcagcagcagcaggttgtttggtaccttgtcccagtcactgaac
agctcccccctggcccagccggacctgtacgcagaggagagcccagaccaggacctggcc
gaggtagacccggaccagctgctcagagagtgtgaggatgtcctgcagaggcgaccggcc
cggccgcaccgggatctggtctatcccagcggcacggcaccctgccaccacaagcacaac
ccatccatacggatcatgcagtggaacatactggcacaagctctgggtgaaggtaaagac
gggtttatccgctgtccactggaagctctcaactggcaggaaaggaagtacttgatcttg
gaggagatcctcacctaccgacccgacatcctgtgtctacaggaagtggaccactactat
gacactttccagccaatcatggccagcctgggttaccatggcagcttcctggcaaaaccc
tggtctccttgtctggatgtagagcagaataacggtcctgacggctgcgctctgtttttt
cgccgctcacgcttctccctccaggccacggctcacctgcggctgtcggccatgatgctg
cccaccaaccaggtagccattgttcagacactacactgccgagtaaccgggcagcggctg
tgcgtggccgtcacccacctgaaagctcgcagtgggtgggagaggctgcggagcgcgcag
ggcgccgacctcctgcagagtttacgcagcatcacatccaggggcggcggccagagcgag
gcgccgtcagccgtcctccctttagtcgtatgtggggactttaacgcagaaccctcagag
gacgtttacaggcgcttcagctcctcccccctcggcctggactctgcgtacaagctgctg
agctctgacagacagacggagccagcctataccacatggaagatccgcccctctggggag
agctgcagcacgctggactatatctggtacacccatgatgctttgagtgtggactgcctg
ctggacattcccactgaggagcagatcggcccaggccgcctcccctcctaccactacccc
tctgaccatttatcactgctctgtgacgtcagcttcagggatgaaccccataggctgatg
tag
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