Lates calcarifer (barramundi perch): 108895522
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Entry
108895522 CDS
T04895
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108895522 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108895522 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108895522 (hars)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108895522 (hars)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108895522 (hars)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108895522 (hars)
Prokaryotic type
108895522 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108895522
NCBI-ProteinID:
XP_018549904
UniProt:
A0A4W6E109
LinkDB
All DBs
Position
LG8:912875..924988
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AA seq
522 aa
AA seq
DB search
MNVLGIFCVRACSGLVGFRTATRVRCLHSFPGITVAQIDEEVAKLLELKAQLGGDDGKHQ
FVLKTAKGTRDYNPKQMAIREKVFNTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDEKFRT
ICSTVDKLDKMAWEDVKKEMVNEKGLSEEAADQIGEYVSMQGGRDLAERLLQDPKMSQSK
QACAGLSDIKLLFSYLELFQVTDKVVFDLSLARGLDYYTGIIYEAVLTQAGVAPVSNETQ
QGAPAEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAEK
VRTTEVQVMVASAQKNLLEERLKLVTELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLV
AILGEQELKDGVVKLRVVATREEFDISRADLLAEIRRRTSEA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgctgggcatattttgtgttcgtgcttgctctggtctggtgggctttcggact
gcaacacgtgtccgatgtctgcattcttttcctgggatcactgtggctcagattgatgaa
gaggtggccaaactgctggagctgaaggctcagttaggaggagatgatggcaaacatcag
tttgtcctcaagacagcaaagggaacgagggactacaaccccaagcagatggccatcaga
gagaaagtcttcaacaccatcatcggctgcttcaaacgccacggagctgagaccatcgac
acacctgtttttgaactgaaggaaacattgacagggaaatatggagaagattccaagctc
atctatgacctcaaagaccaaggaggagagctgctgtccctcagatatgacctcactgtg
ccatttgcccgttacctggcgatgaacaagataaccaacatcaagcgctaccacatcgct
aaggtctatcgccgtgacaacccagccatgacccgtggccgctaccgagagttttaccag
tgtgattttgatatagcagggcagtatgacgccatgattccagatgctgaatgtctgaag
atcgtccatgaaatcctcagtgagctggaccttggagacttccgtatcaaggtcaacgac
aggcgcattctcgatgggatgtttgctgtgtgtggtgttccagatgaaaagttccggacc
atctgttcaacagtggataaactggacaagatggcctgggaggacgtaaagaaggagatg
gtgaatgagaagggcttgtcagaggaggctgccgaccagattggggagtacgtcagtatg
cagggtggaagggacctggcagagcgcctccttcaggacccgaaaatgtctcagagtaag
caggcctgtgctggcctctcagatatcaaactgctcttcagctacctggagctcttccag
gtcacagacaaggtggtgttcgacctcagtctggcccgtggtctggactattacacagga
atcatttatgaggcagtgctgacacaggcaggtgttgccccggtctccaatgaaacccag
cagggtgcacccgcagaggagagtgtcagcgtgggcagcgtggccggagggggtcgctac
gacggcctggtcggcatgttcgaccctaagggcaggaaagtgccatgtgtgggcgtcagc
atcggcatcgagaggatattctccatcatggagcagaaagctgaggcctcagcagagaag
gttcgtaccacagaggtccaggtcatggtggcgtctgctcagaagaacctgctggaagag
cgactcaaactcgtcactgagctctggaacgctggcattaaggcagaggtgatgtacaag
aaaaaccccaaactgctgagtcagctgcagcactgtgaggagtctgggatccccctggtg
gccattctgggagagcaggagctgaaggatggagtggttaaactacgtgtcgtggccacc
agagaggagtttgatatttcccgagctgatttactggctgagatcaggaggaggacctct
gaggcctag
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