Lates calcarifer (barramundi perch): 108895528
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Entry
108895528 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: nucleotide exchange factor SIL1
KO
K14001
nucleotide exchange factor SIL1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108895528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108895528
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
108895528
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Gene cluster
GFIT
Motif
Pfam:
Fes1
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108895528
NCBI-ProteinID:
XP_050928097
UniProt:
A0AAJ8B800
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Position
LG8:complement(1317958..1322443)
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AA seq
451 aa
AA seq
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MRLISCSATGASLSSLTLAFLLLLPCHHVASILGQKSDSALTVVEDAEGGEGAGADEEEE
VMVDLKVVKPTAQWQTLKPEEAVPAGSHVRLNLQTGQREVRLGEEQLKYWTQEHREREAT
QPTFSPDELKQAMKKIKEDLNPDSVASKYRPLEELKRDMAQLDLLIETDVQIMRRLLDQF
NSSNSTTEQRLNILHELEYLVHQVDNAQTLCSMGGLQLILGGLNSSDVRLQESSAFVLGS
ALSSNPEVQVKAVESGALQMLLTALVTAQPLQVKKKVLFAVASLLRHFPYAQRNFLSHGG
LQVLSELFRADGGGVLRTRVVTMLYDMISEKELISQTGLDPVLDASHEERVRQYSKVSLE
GGLLENGWCSLVPQLLESTEHDYREKALRALLAMAPTCLNQYRSDSALLGSLLSLRDQYQ
EMVQSEMILGEENSYFAEIVDLIDALQVKMK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgatatcctgcagtgctacaggagcttcactcagcagcttaaccctggctttt
ctcttgttgctgccctgccatcacgttgccagtattcttggccagaagtctgactctgcc
ctgactgtggtggaggatgcagaaggaggagaaggagcaggtgctgatgaagaagaggag
gtgatggtggatttaaaggtggtcaaacctactgcacagtggcaaacactcaaaccagag
gaggcagtgccggcaggttcccatgtgaggctgaatctgcagacaggtcagagagaggtc
agactgggagaagagcagctcaaatactggacacaggagcacagggagagagaagcaacg
cagcccaccttcagtcctgatgaactgaagcaggccatgaagaagataaaggaggacctg
aacccagactctgtggcctctaagtatcgccccctagaggagttaaagagagacatggct
cagctggacctgctaatagagacggatgttcagataatgaggcgtctgcttgaccaattc
aacagcagcaactcgactacagagcagagactgaacatcctgcacgagctggagtatctg
gtgcaccaggtggataatgctcagactctgtgctcgatggggggtctccagttgatccta
gggggtctgaacagctctgacgtcagattacaggaaagctctgcctttgtcctggggtct
gctttgtccagtaacccagaggttcaggtgaaagctgtggagagtggagctctgcagatg
ctgttaactgcactggtcactgcacagccactccaagtcaaaaagaaggtcctgtttgca
gtggcctcgctcttacgtcacttcccctacgcacagcgtaacttcctgtcacatggggga
ctccaggtcctatcagagttgttcagggcagatggaggcggagtcctgcgaacacgcgtt
gtcaccatgttatatgacatgatcagcgagaaggagctgatctctcagactggtctggac
ccggtcctggatgcctcccatgaggagcgtgtgcgtcagtactccaaggtgtccctggag
ggggggctgctggagaatggctggtgcagtctggtcccacagctgctggagtccactgaa
catgactacagagagaaggctctgcgggctttgttagcgatggctccgacgtgcttgaat
cagtaccgctcagacagcgctctgctgggctctctgctctctctccgagaccagtaccag
gaaatggtccagtcagaaatgattctaggggaggagaacagctactttgcagagattgta
gatcttatagatgctctacaagtgaaaatgaaatga
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