Lates calcarifer (barramundi perch): 108895532
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Entry
108895532 CDS
T04895
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04145
Phagosome
lcf04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108895532
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108895532
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108895532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895532
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108895532
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
Scavenger receptors
108895532
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108895532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
108895532
NCBI-ProteinID:
XP_018549919
UniProt:
A0A4W6F1D3
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Position
LG9:complement(879916..897676)
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AA seq
509 aa
AA seq
DB search
MAVNKSKVAVGFIVAGVLTVVFGTVLSFVGPLIIDDQIVKNTVIDPKNEMSYTMWKDIPV
PFFMSVYFFNVLNPQEILKGEKPMVEQRGPYVYRKRCQKDNITFHPNNTVSYREYRQYYF
EPSMSAGSESDVVTIPNMLVLGAAVMMENLPYAVRLMISATFKTFKEGPFLTKTVGELMW
GYDSGLVDFLNKYLPGMLPSTGKFGLFAEFNNSNTGLFTIFTGQDDIRKVHRVDSWNGLT
ELSYWRTPQCNMINGTAGQMWPPFMTKETTLPFYSPDACRSMELVYQRPGVMKGIPLYRY
VAPKTLFANGTDYAPNEGFCPCRQSGLLNVSSCRHNSPVFISHPHFYNADPVLLDYVQGL
SPNEDKHGLFIDIHPQTGVPLNVSIRLQLNLYMKRVSGITETGKISEVVMPMIWFEESGY
IDGPILTTFHTNLVVLPAVMEYMQYGFIALGLATILIAALVHHRAKKAHRKATVIFTEDK
NLGASRKESIKGSHGHEIQEKSILNNSEK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaataaatctaaagtggccgtggggtttatcgtggcgggggtcctgaccgtg
gtgttcgggacggtcctgtcgtttgtgggacctttaataatcgacgaccagatagtgaag
aacaccgtgatcgacccaaagaacgagatgtcctacaccatgtggaaggacatccccgtg
ccgttcttcatgtccgtctacttcttcaacgtcctcaacccgcaggagatcctgaaggga
gagaagcccatggtggagcagcgaggaccttatgtttacaggaaacgctgtcagaaagac
aacatcacgttccatcccaacaacacggtgtcgtacagggagtacaggcagtactacttc
gagccttccatgtctgcggggagtgagtccgacgtcgtcacgattcccaacatgttggtg
ctgggagcggccgtgatgatggaaaacctgccgtacgccgtgcgtctgatgatcagcgcc
acattcaagactttcaaagaggggcccttcctgaccaagaccgtcggggagctgatgtgg
ggttacgacagcggcctggtggatttcctcaataaatacctgcctggcatgctgccctcc
acggggaagttcggcctctttgctgagttcaacaactccaacaccggtctgttcaccatc
ttcaccggtcaggacgacatcaggaaagttcatagagttgactcttggaacgggctgacg
gagctgagctactggaggactcctcagtgcaacatgatcaatggaacagctgggcagatg
tggcctcctttcatgacgaaggagacgactctgcctttctacagccctgatgcctgcaga
tccatggagctcgtttaccagcgtcccggcgtgatgaagggaatccctctgtatcgatac
gtcgcccccaagaccctgttcgccaacgggacagactacgcccccaatgaaggattctgc
ccctgtcgacagtccggtctgctcaacgtcagcagctgtcgccacaactctccagtcttt
atctctcatcctcacttctacaatgctgatcctgtgctgctggactatgtgcagggcctc
agtcctaatgaggacaagcatggcctcttcatagacattcacccacaaacaggtgtccct
ctgaacgtgtccatccgtctgcagctcaacctctacatgaagagagtgtcaggaattaca
gaaactggcaagatttctgaggtggtgatgcccatgatctggttcgaggagagcggttac
atcgacggccccatcctcaccaccttccacaccaacctggtcgtcctccccgccgtgatg
gagtacatgcagtacggcttcatcgcgctcggcctggccacgatactgatcgccgccctg
gtgcatcatagagcaaagaaggctcatagaaaagcgacagtgatcttcactgaggataaa
aatctcggggcgtcccgtaaagagtcgataaaaggctcacacggccacgaaatacaggag
aaaagtatcctgaataactcagagaaataa
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