Lates calcarifer (barramundi perch): 108895551
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Entry
108895551 CDS
T04895
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108895551
04145 Phagosome
108895551
04137 Mitophagy - animal
108895551
04148 Efferocytosis
108895551
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108895551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895551
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108895551
04031 GTP-binding proteins [BR:
lcf04031
]
108895551
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108895551
Endosome - Lysosome transport
108895551
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108895551
Exosomal proteins of other body fluids (saliva and urine)
108895551
Exosomal proteins of colorectal cancer cells
108895551
Exosomal proteins of bladder cancer cells
108895551
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108895551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
108895551
NCBI-ProteinID:
XP_018549937
UniProt:
A0A4W6F0F0
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQAAGANSGRNRGVDLTEAAQPAKAPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcggggaggagctacgagacccaatggacccaatgcagggaacaagatctgt
cagtttaagctggtgctgctgggggagtcagctgttgggaagtccagcttagtgcttcgc
tttgtcaagggccagttccatgaattccaggagagtacaataggagcggcctttctcacc
cagacagtgtgtctagatgacacaacagtgaagtttgaaatctgggacactgcaggccag
gagcgttaccacagtttggcacccatgtattacagaggagcacaggctgccattgtggtc
tacgacatcacaaacgaggagtccttcgcacgggcaaagaactgggtgaaggagctgcag
agacaagcaagtcctaatatagtcatcgctctgtcaggcaacaaagctgacctagccaac
aagagagctgtcgacttccaggatgcccagtcctacgcagatgacaacagcttacttttc
atggagacgtcagctaagacatctatgaatgtgaatgagatatttatggctattgcaaag
agattgccaaaaagtgagccacaggctgcgggagccaacagcgggcggaaccggggagtg
gacctgacagaagctgcccagccagccaaggctccgtgctgcagtaactaa
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integrated database retrieval system