Lates calcarifer (barramundi perch): 108895597
Help
Entry
108895597 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108895597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108895597
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108895597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108895597
NCBI-ProteinID:
XP_018549988
UniProt:
A0AAJ7Q908
LinkDB
All DBs
Position
LG7_1:complement(12382907..12393431)
Genome browser
AA seq
555 aa
AA seq
DB search
MGYNHLFSLGTTVVWSLLLSQSVLCQDKTHSHAEDVLFKKLFAGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGKIRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERIENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDLIPRWLFMRRPAP
DGRRRRLLLLQQEAAAERRQGRISGYKSSNCLSTSANWLRDGTTLEDPERSCYEDLELGT
LTSYFSFRPPSPRPPGSTPPPQQKTPQNSQNRQEAARGTNRQITGTRDNPSQRPTKVDNT
VSDSTFLLSPSVIRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLL
GTIGLFLPPWLAGMI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggatacaaccacctgttctctttggggacgactgttgtgtggtcgctgctcctctct
cagtcagttctctgtcaagacaaaacgcactcgcatgctgaggatgtgctcttcaagaag
ctgtttgctggttacaacaagtggtcgagacccgtgccaaacatctctgatgtggtgatc
gtcaagtttggactgtccatagcacagctcattgacgtggatgagaagaaccaaatgatg
acaaccaatgtgtggcttaaacaggagtggaatgactacaagcttcgctggagaccgtct
gactatgacaatgtgacgtccataagagtgccatcagagctcatatgggtgccagacatc
gtcctctataacaatgccgacggtgagtttgctgtgactcacatgacaaaagctcaccta
ttccacacgggtaaaatacgctgggtcccacccgccatttacaagagctcctgcagcatt
gacgtcaccttcttccccttcgatcaacagaactgtaagatgaagttcggctcttggacc
tatgacaaggccaagattgacctggagcgaattgagaacactgtggatctcaacaactac
tgggagagcggtgaatgggccatcatcaacgctgtgggaacgtataatacaaagaaatat
gactgctgccatgagatctacccggacatcacctacttcttcatcatccgaaggcttccc
ttattttacaccatcaacctcatcatcccctgtctgctgatctcctgcctcactgtattg
gttttctatctgccctcagactgcggtgagaagatcaccttgtgcatctcagtgctgctg
tccctcactgtcttccttctcctcatcacagagatcattccatccacatctctcgtcatc
cccctcatcggcgagtacctcctcttcaccatgattttcgtcaccctatccatcgtcatc
accgtcttcgtgctcaacgtgcaccatcgctcccccagcactcacaagatgccccgctgg
gtccactctgtgttcctggacctgatcccgcgttggctgttcatgcgacggcccgcgcca
gatggccggcgtcgcaggctgctgctgctccagcaggaggcggcagcggagcggcggcag
ggccggataagcgggtacaaatccagcaactgcctcagcacctcggctaactggctgaga
gacgggaccacattggaggaccctgagaggagctgttatgaggatttagagctgggaacg
ctgacgtcttatttctccttccgtcccccttcgcccagacctccagggtcgactcctccg
ccacaacagaaaaccccacagaacagccagaaccgacaggaagcagccagagggacgaac
agacagataactgggaccagagacaatccctctcagcggccaactaaagttgataataca
gtatcagactcaacattcctgctttcaccaagtgttatacgcgcattagaaggggtgcac
tatattgcagaccacctgagggctgaggatgctgacttcagtgtgaaagaggactggaag
tatgttgccatggtgattgaccgcatcttcttgtggatgttcattattgtgtgcctgctt
gggaccattggcctcttcctgcccccttggctagctggcatgatctaa
DBGET
integrated database retrieval system
