Lates calcarifer (barramundi perch): 108895621
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Entry
108895621 CDS
T04895
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03410
Base excision repair
lcf04210
Apoptosis
lcf04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108895621
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108895621
04217 Necroptosis
108895621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108895621
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895621
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108895621
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108895621
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108895621
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108895621
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108895621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
108895621
NCBI-ProteinID:
XP_018550023
UniProt:
A0A4W6D8R6
LinkDB
All DBs
Position
LG7_1:complement(11371063..11381933)
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSQEDKLYRAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTADIAGYSDLRWEDQEKVKKAIESGGAAGGKGDQKSGAKGEKTLNDFAVEYAKS
NRSTCKGCDQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELAFKPEYTAAQ
LKGFNALRAEDKEELKKRLPAVKSEGKRKSDEVDGVSKKQKKEEEEEKKKLDDQLKNQSQ
LIWGIKDKLRKFCSINDMKELLIANGQEVPSGESNVVDCLADGMAFGALEACKECKGQLV
FKGDAYYCTGDISAWTKCVFKTATPVRKDWVIPKEFNEVPFLKKFKFKRQDRVYPKEAPN
QTQAAAKAKPLASASSAPMERLPEGAPSDKPLTGMKLLAVGKLTKNKDDLKAAVEEMGGK
ITGTASKASLCLSTKKEVEKMSKKMEEVRDAGVRVVSEDFLTDIKSSGKAIQELVSLHAI
SPWGAEVKVEAQAPSAASKSGALATKSTGRVKEEEGGSKAKKMKLTVKGGAAVDPDSGLE
NSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSALDNFLGVYKEKTGNDWGSSNFTKYPNKFYPLEIDYGQDEEAVKRLTATAG
TKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQAV
SDGVPEAQILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLRG
GAQDNENDPIDINYEKLKTKIEVVDKNTNEAEIIMQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRYRPFEELHNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLILLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPSA
AASLDGVQVPLGKGVHTNIDDTSLLYNEYIVYDVAQINMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcaagaggacaagctgtacagggcggaatacgccaaaagcggccgtgca
tcgtgcaagaaatgcaaagaaaacatagctaaagactcgctgaggatggccatcatggtg
cagtcccccatgtttgatgggaaggtcccacactggcaccacttctcttgcttctggcag
cgagcagcagctcagtccactgctgacatcgccgggtactctgacctccgctgggaagac
caggagaaggtcaaaaaggccattgaaagtggtggagctgctggaggaaaaggggaccag
aagagcggagctaaaggggagaagacactgaatgactttgcagtggaatacgccaagtcg
aaccgcagcacgtgcaaaggctgtgaccagaaaatagaaaaggatcagattcgtgtgtcc
aagaaaactgtggacccagagaagccccagctgggtctgattgaccgctggtaccacacg
gcgtgtttcgtcagtcgcagggaggagctggccttcaaacctgaatacaccgccgctcag
ctgaagggtttcaacgcgctacgggctgaggacaaggaagagcttaagaagaggcttcct
gctgtcaaatctgaaggaaagcgtaaatctgacgaggtggatggagtatcgaagaaacag
aagaaggaagaagaggaagagaagaaaaagctggacgatcagttgaagaaccaaagccag
ctgatttggggaatcaaggacaagctgaggaagttttgttcaatcaatgacatgaaggag
ctgctgattgcaaatggccaggaggttccctctggagagtccaatgtggttgactgcctg
gccgacggtatggcgtttggtgctcttgaggcctgtaaggagtgcaagggtcagctggta
ttcaagggtgatgcttattactgcacaggagacatctcagcttggacaaagtgtgttttc
aaaacggcaacacctgtacgcaaggactgggtcatccccaaggaattcaatgaggttcct
ttcctgaaaaaattcaagttcaagcgtcaggacagagtttaccccaaggaggctcccaac
caaacccaagcagcagccaaagccaaaccactggccagcgcatccagtgccccgatggaa
cgacttccagagggagcaccttcggacaaacctctgacgggtatgaaactgttggctgtg
ggtaagctgaccaagaacaaggacgatttgaaggctgctgtggaggagatgggtggaaag
attactggcacagccagtaaagcctctctctgcctcagcaccaagaaggaggtggagaag
atgagtaagaaaatggaggaggttagggatgccggcgtgcgcgtggtctctgaggatttc
ctcacagacatcaagtcgtcgggaaaagctatccaggagctggtctccctgcacgccatc
tcaccctggggcgctgaggtcaaggtcgaggctcaggctccgtctgcggcctccaagtct
ggagcactggctaccaagagcacagggagagtgaaggaggaggaaggtggtagcaaagcc
aaaaagatgaagctcacagttaaaggaggagctgctgtggatccagattcaggtctggag
aacagtgctcatgtcctggagcagagtgggaagatgtatagtgccacgctgggccttgtg
gacattgtcagaggaactaactcctactataaactgcagctgctggaggatgatgtacag
aaaaggtactgggtgttcaggtcatggggcagagtgggtaccaccattggaggcaacaag
ctggacaagttccatgacaaaaactctgccctggacaacttcctgggtgtctacaaggag
aagacgggcaatgactggggctcctccaacttcaccaaatatcccaacaagttctaccca
ctagagattgattatggacaggatgaggaggcagtgaagaggctgacggccaccgctggc
accaagtccaagctggccaaaccagtccaggagctgattaagatgatctttgatgtggag
agcatgaagaaggccatggtggagtttgagattgaccttcaaaagatgcctcttggaaag
ctgagtaagaggcagatccagagtgcctacgctcttctcactgaagtacagcaggctgtg
tcagatggtgtgccagaggcgcagatactggatctctccaatcgcttctacaccctgata
cctcatgactttggcatgaagaaaccgccactgctcagcaacctggactacattcaggct
aaagttcagatgttggacaacctgttggatattgaagtggcatacagtctgctgagagga
ggggcccaggataacgagaacgatcccatcgacatcaactatgagaaactcaaaaccaag
atcgaggttgtcgataagaacacaaacgaggctgagatcattatgcaatatgttaagaac
acccacgctgctacgcacaacacttacacactggaagtgcaagaaatctttaagattgtt
cgtgagggagagcgccagagataccgtcctttcgaggagctacacaatcgccagctactg
tggcacggttcgcgcgccaccaactacgctggtatcctgtctcagggtcttcgtatcgcc
cctccagaggccccagtgactggttacatgtttggcaaaggtgtgtactttgctgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccctgttggcctcatactg
ctggctgaggttgcccttggcaacatgcatgaactgaagaaggcctcccacattacaaaa
ttacctaagggcaaacacagtgttaaaggtttgggtagaactgctcctgatccaagtgct
gctgcctctttagatggggtgcaagtgcctctgggaaaaggagtccacactaacattgat
gacacaagtctactgtacaatgagtacattgtgtatgatgtagcgcagataaacatgaag
tatctcctgaagatcaagtttaactaccagacgtccctgtggtga
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