Lates calcarifer (barramundi perch): 108895642
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Entry
108895642 CDS
T04895
Name
(RefSeq) tubulin alpha-1B chain
KO
K07374
tubulin alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04145
Phagosome
lcf04210
Apoptosis
lcf04530
Tight junction
lcf04540
Gap junction
lcf04814
Motor proteins
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108895642
09143 Cell growth and death
04210 Apoptosis
108895642
09144 Cellular community - eukaryotes
04530 Tight junction
108895642
04540 Gap junction
108895642
09142 Cell motility
04814 Motor proteins
108895642
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108895642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895642
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895642
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108895642
04147 Exosome [BR:
lcf04147
]
108895642
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108895642
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108895642
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108895642
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108895642
Exosomal proteins of other body fluids (saliva and urine)
108895642
Exosomal proteins of colorectal cancer cells
108895642
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
108895642
NCBI-ProteinID:
XP_018550052
UniProt:
A0AAJ7Q9B7
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All DBs
Position
LG7_1:complement(11755999..11759636)
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AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPSN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcagtccacgtgggtcaggctggagtccagattggcaatgcatgc
tgggagctttactgcctggaacatgggatccagcctgatggtcagatgcccagtgacaag
accattggaggaggagatgattcttttaacaccttcttcagtgagactggagctggaaag
catgtccccagagctgtgtttgtagatctggagcccactgtcattgatgaggtgcgcact
gggacctacaggcagctgttccatcctgagcagctgatcactggcaaggaagatgctgcc
aacaactacgcccgtggacactacaccattggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcagggcttcctggttttccacagc
tttggaggtggtactggttctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtctaagctggagttctccatctacccagctccccaggtgtccactgct
gtggtggagccttacaacgccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtggataacgaggccatctacgatatctgtcgcaggaacctggatatcgag
cgtcctacctacaccaacctgaacaggctgatgagtcagattgtgtcctccatcactgct
tctcttcgttttgacggtgcccttaatgttgatctaacagagtttcagaccaacttggtg
ccgtatccccgcatccacttccctctggccacctatgcccctgtcatctctgctgagaag
gcttaccacgagcagctgacagtggcagaaatcaccaacgcctgctttgagccgtccaat
cagatggtaaaatgcgaccctcgccatggcaagtacatggcctgctgccttttgtaccgt
ggtgatgtggtgcccaaagacgtcaacgctgccattgccaccatcaaaaccaagcgcacc
attcagtttgtggactggtgccccaccggtttcaaggtcggcatcaactaccagccgccc
accgtggttcctggtggagacctggccaaggttcagagggctgtgtgcatgctgagcaac
accactgccatagcagaggcctgggctcggctcgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtaggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattatgaggaggttggagttgactctgtt
gagggtgagggagaggaggagggtgaggagtattag
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