Lates calcarifer (barramundi perch): 108895690
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Entry
108895690 CDS
T04895
Symbol
rtn4a
Name
(RefSeq) reticulon-4a isoform X1
KO
K20720
reticulon-4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895690 (rtn4a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895690 (rtn4a)
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108895690 (rtn4a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108895690 (rtn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
108895690
NCBI-ProteinID:
XP_018550116
UniProt:
A0AAJ7Q964
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Position
LG16_LG22:22884734..22918365
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AA seq
869 aa
AA seq
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MADSEEQQVSSTTPLFNEEVHHYQAEPDQPKQDLFSVDDIVDLVGGAQDALERHIAEDSA
PHEVTETSFAPPEAPVTLLEPEPVSMPEVKEPEPEPEKVIPDSTSSFVPETPLVAEDPEV
VAPKAEPEITNIIPEPQAAPEPKPAPESDALPVAEPRKASPAPAEAAERPAVTEEPPAPA
SYVPSPSKAQPHPLMQFPTEPWDSPFLTSQDNSKVSMDSFSKDTAPISSSKYEPDLHGNQ
SDEDDDLMYEVKKNNNPFEGYSPLADSGYSHFGDSKSDSRASKMSESPTPDLVQYGQTGE
SLDSPPSFLDEGKSFEMGKMAPDSLMQSVNQFSSGLKDDDEGEEEDSTLPPSLPDILKSS
PLNPEKIDSGSSEGSPEEQSPILERRMMESPNPPINLSANNPFAFDAKVSLLKEMAEEME
VRAADKTKVEDDKSFGAFDLVKEAEETTPAKVKEEEPVKIEQKDWFSSHDSPKMTEKFEP
LDFQSKKTPAEDSDSESPTADSLSPVLEAMAKNPASFQVETEKRDLKMEVEEPEVAEEVS
EHEVSSEEFEFIERPPRGVIDEFLEALDTSKFASSKAPEIPMDDDLSFGLKDVTPVSAPP
PTKVAPPPEVEEEAPSQGSYRLLTQASPQKSKAELEKLDIQQPPLQAPLTHSPVGKPEEP
VAKKSVEGSKLFKMPNLNIRAVVDLLYWRDVKTTGVVFGAALLLLLSLTVCSIVSVCSYI
GLALLSVTICFRIYKGILQAIQKSDEGHPFKLYLDQEVALSEDMVHKYSDMVLAKLNKII
AELRRLFLVEDLVDSIKFAVLMWILTYVGALFNGLTLLILCLIGAFSCPIVYEKHQAQID
HYLALVNNQIKDVVGKIQAKVPGMKRKTE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgaggagcagcaagtctcttccaccactcctctattcaacgaggaggtg
catcactaccaggccgagccggaccagcccaaacaagacctattcagcgtagacgatatt
gtggacttggtcggcggggctcaggacgccttggagaggcacattgcggaagacagtgcg
ccacacgaggtcacagaaacttccttcgctcccccagaggcgccggtaacattactggag
ccagaaccggtgtcaatgccagaggtaaaggaacctgagcctgagcctgagaaggtgatc
ccggactccaccagctcttttgttcctgagacccctttagttgcagaggatccagaagtc
gtcgcccctaaagccgaaccggagatcacaaacatcataccggagccacaggctgccccc
gagcccaaacctgccccggagagcgacgccctcccagtggctgaaccccggaaagcatcc
ccagcccccgcagaggcagcagagcgacctgcggtgacggaggaaccaccggctcctgca
tcttatgtaccttctccttctaaagctcaacctcatcctctgatgcaattccccacagag
ccctgggattcaccattcctaacatctcaagacaactccaaggtctccatggatagcttc
tccaaggacacggcccccattagctcttccaagtatgagccagacctgcacggcaaccag
tctgatgaagatgatgacttgatgtacgaagtgaagaagaataataacccatttgaaggc
tattccccactggcggatagtggctactctcattttggagactccaagtctgacagcaga
gcctctaaaatgtcagagagtcccactccagatctggtccagtacgggcagactggagaa
tctctggatagcccaccatctttcttagacgaggggaaatcatttgagatgggcaagatg
gctcctgactcgctcatgcagtcagtgaatcagttctcatctggtcttaaagatgatgat
gaaggggaagaggaggattctactcttccgccatcgcttccagacatccttaagtcttcc
ccactcaaccctgaaaaaatcgactctggctcttcagagggaagcccagaggagcagagt
cccatcctagagcggaggatgatggagtctcccaaccctccaattaatctgtctgctaac
aacccgtttgcttttgatgctaaagtgtcccttctgaaggagatggctgaggagatggag
gtgagagctgcagacaaaacaaaagttgaagatgacaaaagctttggcgcattcgatctt
gttaaagaggcagaggaaacgaccccagctaaggtcaaagaggaggaacctgtcaaaatt
gagcagaaagattggttctcaagccatgattctcccaaaatgaccgaaaagtttgagcca
cttgacttccagagcaaaaagacccccgctgaggattcagattcagagtcaccaactgca
gactctctgtctccagtcctggaagctatggccaaaaatcctgctagcttccaggtggaa
actgagaagagggatctaaagatggaggtggaggagccagaggtggctgaggaggtctct
gagcatgaagtgtcctctgaggagtttgagttcattgagcgaccacccaggggcgttatt
gatgagttccttgaggctctggatacttccaagtttgcctcctccaaggccccagaaatc
cccatggatgatgatctgagctttggtctgaaagatgtaactccagtttcagcccctcct
ccaacaaaagtagccccacccccagaggttgaagaagaagctccaagtcagggctcctac
cgcctccttacccaagcctcccctcagaagagcaaggctgaacttgagaagctcgacatc
cagcagcccccactccaggctccgctcactcattcccctgtcggtaaaccagaggagcca
gtcgccaagaagagtgtggagggcagcaaactgtttaagatgccaaacctgaacataaga
gcagtggtggatctcctctactggcgtgatgtgaagaccacgggcgtggtgtttggcgcc
gccctgctgctgctcctctccctgacggtgtgcagcatcgtgagcgtctgctcctacatc
ggcctggctctgctctcagtcaccatctgcttcaggatatacaaaggcatcctgcaggcc
atccagaagtcagatgagggacacccattcaagctgtacctggaccaggaggtggctctg
tctgaggacatggtccacaagtacagtgacatggttctggccaaactcaacaagatcatc
gctgagctaaggcgcctgttcctggtcgaggacctggtcgactccatcaagtttgctgtg
ttgatgtggatcctgacctacgtcggtgccttgttcaacgggctcactcttcttattctg
tgtctgattggagcgttcagctgcccgatcgtctatgagaaacaccaggctcagatcgac
cactacctggctctggtcaacaaccagatcaaagacgtcgttggaaagatccaggcgaag
gtgcccgggatgaagcgcaaaacagagtga
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