Lates calcarifer (barramundi perch): 108895692
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Entry
108895692 CDS
T04895
Symbol
ttc7a
Name
(RefSeq) tetratricopeptide repeat protein 7A isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895692 (ttc7a)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
108895692 (ttc7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_14
TPR_19
TPR_2
TPR_16
TPR_CcmH_CycH
ANAPC3
TPR_1
TPR_11
ARM_TT21_2nd
Iml2-TPR_39
TPR_20
Motif
Other DBs
NCBI-GeneID:
108895692
NCBI-ProteinID:
XP_018550125
UniProt:
A0AAJ7VET7
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All DBs
Position
LG16_LG22:22956039..23005569
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AA seq
889 aa
AA seq
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MSSFQRENEAAKSLFRRLESAVTPIVSGEYSHHRDRAAMASRVSFTQIRLEAELERYRAE
CQWDKMPAIIDQMQAARMHEDDDYGTLLMAEALLEECLQENMDLLRSSTPLMDKTQLKLC
RAKGHLNTILSRGRLTPRYLNEALLLMAKVHYVQGRYRDAQGMCARVGLEELTQDDQPTY
HLRLLAEAFVIKGLSLDHQTVSAVSRVRLSEREEESLSCYLRACDAALSYLQELDKVVTT
PHSKTAKASLLPPPVDIDLGYFLQAALQSAYICLLQRGHLAQGAHQLRRVLRVVESRGSQ
SFKKSAARKLAEVLLSSVSEDSYWPPLGPPPSAWLHREGAAASKDAMYPTVKPPQRYSTD
CCFCPQDVVEEAVLLLLITESMASGEAVISRLPDQADARQASLQDAASVYDLLTIGMARR
GQYAMLSECLERAMKFSFNEFHLWHQLGLSLMAAGKGVGAVSVFKECARMRPEDPSLPLL
AAKVCIGQLHWFEEAEVLSQRVVSMGEEAGEFLPRAYLALGLCCSLQASEATLKADRNEF
NKRALQALNKAHSLDPLDAQIAMYLALQLALVRQVSAAMEPLQTALSLHGDDVHSLHLLT
LLLSAQKHHRHALDTLGLALSQHPDNFNLLFTKVKLEEALFGPAAALQTCEEMLQRWQSR
YDVSRSSETDDSSSIPMAETAEVSPGGRKPSIHLTLPDFQDASTGSLSPSSVAVSRLEAA
LSEVSDISSTRRQGPTYIWTTLERIWLQAGELFMADGRLKEAQFCIAEASALFPNSHSVL
LQRGHLAELRGQLDEAKGLYDEALAIHPTGERILVHMGRLLVKSGRAHLGEKVLRDAVQV
HSTSHEAWSGLGEALQSLSSSQAPDCFLTALELEASCPIRPFTIIPREL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtttccagagagaaaatgaggccgcaaaatctctgttcaggaggcttgagtct
gcagttactcccatcgtgtccggggagtacagtcaccaccgggacagagcagcgatggca
tcccgagtctccttcacccagatccggctggaagcggagctggagcgctaccgggccgag
tgccagtgggacaagatgccggcgatcatcgaccagatgcaggcggcgcggatgcacgag
gacgacgattacgggacactgctgatggctgaggcgttgctggaggagtgcctgcaggag
aacatggacctgttgcggagttccacacctttgatggacaagacccagctcaaattgtgc
agggcgaaaggccacctcaacaccatcctgagccgaggccgtctcacacccaggtacttg
aatgaggctctgctgctgatggccaaggtgcattatgtgcagggtcgctaccgtgacgcc
cagggaatgtgtgccagggtgggactggaggagctgacacaggatgaccagcctacctac
catctgcgactgctggctgaggcgtttgtcattaaaggtctatctctggaccaccagact
gtttctgcagtgtctcgggttcgtctgtcggagagggaggaggagagtctgtcctgttac
ctcagggcctgtgatgctgctctgtcctacctgcaggagctcgataaggtagtaactaca
ccccacagcaaaacagccaaagccagtctgcttcctccacctgtggacattgacctgggc
tacttcctacaggctgcattacagagtgcttacatatgtctgctgcagaggggtcatctt
gcgcagggtgcacaccaactgcgtagggtgctcagggtggtggagtcacgagggtctcag
agcttcaagaagtctgcagcgaggaagctagcagaggtgctgctgagctcagtgagtgaa
gacagctactggcccccgctgggccccccaccttcagcctggcttcacagagagggagct
gccgcctccaaagacgccatgtatcccactgttaaaccaccacaacgttacagcactgac
tgttgcttttgtcctcaggacgtggtggaagaagcagtgttgctgctgctcatcacagag
tccatggccagtggcgaagcggtgatcagtcgtctgcccgaccaggccgatgcccgccag
gccagcctgcaggatgccgcctctgtctacgacctgctcaccatcggcatggccaggagg
gggcagtacgccatgctgtctgagtgtctggagcgagccatgaagttctcattcaacgag
ttccacctctggcaccagctgggcctgtcactcatggcggctgggaagggggttggtgct
gtgtctgtctttaaagagtgcgccaggatgagaccagaggacccttcattgcccctgttg
gctgctaaagtctgcattggtcagctgcactggtttgaggaggcagaggttctgtcccag
agagtggtgtctatgggggaggaagctggtgagtttctgcccagggcctacctggctctg
gggctctgctgcagtctacaggcctctgaagctactctcaaagcagatcggaatgaattc
aacaaaagggcgctgcaagctctgaacaaggctcactcattagaccccctggatgctcag
attgctatgtacctggctcttcagctggcacttgtgcgccaggtatcagcagccatggag
cccctgcaaacagctttatctctccatggagacgatgtacactcccttcacctgctgacc
ctgctgctaagcgcccagaaacaccaccgtcatgcgttggacacgctgggcttggccctc
agccagcaccctgacaacttcaatttgctgttcacaaaggtgaaacttgaagaggctctg
tttggcccggctgcagccctgcagacctgtgaagagatgttgcaacgctggcaaagccgc
tatgatgtgagccgctccagtgagacagatgacagcagcagtataccgatggctgagaca
gcagaggtcagccctggtggcaggaaaccctccatccacctgaccctgcccgacttccag
gacgcctctactggttcattgagcccttcatcagtcgcagtgtctcgtctggaagcggcg
ctctctgaggtgtcagacatcagctccacccgtcgccaaggacccacctacatctggact
accctggaacgcatttggctgcaggctggggagctgttcatggcagacggtcggctgaag
gaggcccagttctgcatagccgaggccagcgcgctcttccccaattcgcattcggtgctg
ttgcagcggggccacctggccgagctccggggccaactggacgaagccaaaggcctgtac
gatgaggctctggccatccatcccacaggagagcgcatactggtgcacatgggccgtttg
ctggtgaaaagcgggcgtgcccacctcggggagaaggtcctgcgtgatgcagttcaggtc
cacagcacctcccatgaggcgtggagtggcctgggcgaggccctgcagtctctgagctcc
agccaggcccccgactgcttcttgacggctctggagctcgaggcctcctgccccatccgg
cccttcaccatcatccccagggagctctga
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