KEGG   Lates calcarifer (barramundi perch): 108895696
Entry
108895696         CDS       T04895                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03010  Ribosome
lcf04120  Ubiquitin mediated proteolysis
lcf04137  Mitophagy - animal
lcf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108895696
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108895696
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108895696
   04137 Mitophagy - animal
    108895696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lcf03011]
    108895696
   04121 Ubiquitin system [BR:lcf04121]
    108895696
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108895696
Ribosome [BR:lcf03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108895696
  Archaea
    108895696
Ubiquitin system [BR:lcf04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108895696
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108895696
  Exosomal proteins of colorectal cancer cells
   108895696
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 108895696
NCBI-ProteinID: XP_018550129
UniProt: A0A4W6C4C7
LinkDB
Position
LG16_LG22:complement(22866892..22869871)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gataccattgaaaatgttaaggccaaaatccaggacaaagagggtatccctcctgatcag
cagaggttgatctttgctggaaagcagctggaggatggacgcacactgtccgactacaac
atccagaaggagtccaccctgcacctggtgctgaggctgcgtggtggtgccaagaaaagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagaggaagaaggtcaagctc
gctgtgctcaaatactacaaggtggatgagaacggaaaaatccaccggctgaggcgtgag
tgcccagctgatgagtgtggtgccggcgtcttcatggcaagccacttcgaccgccattat
tgtgggaagtgctgcctcacctactgcttcaacaagcctgaggacaagtag

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