Lates calcarifer (barramundi perch): 108895735
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Entry
108895735 CDS
T04895
Name
(RefSeq) proto-oncogene c-Rel
KO
K09254
c-Rel proto-oncogene protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895735
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108895735
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
108895735
NCBI-ProteinID:
XP_018550151
UniProt:
A0A4W6BY89
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Position
LG16_LG22:23498458..23514385
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AA seq
649 aa
AA seq
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MNVLMPSILGDDPHLMAEPAVQIFEQPKQRGMRFRYKCEGRSAGSIPGEKSSDNNRTYPS
LQILNYSGKGKVRVYLVTKNEPFRPHPHDLVGKDCKDGFYEAEFGPDRRVIAFQNLGIQC
VRRREVKDAIVQRITRGINPFNVPREQLLQTEEYDLNVVRLCIQVFLQDENGHYTRSLNP
IVTNPIYDNRAPNTAELRICRVNRNSGSVKGGDEIFLLCDKVQKDDIEVRFFSSDGWEAK
GSFSQADVHRQVAIVFKTPPYYNTSITESVTVHMQLRRPSDQEVSEPMDFRYLPDDKDPY
GYNEKKRRREHLMKISGLSGGPFAGLAMNRPKAVAQSSMSHMRKDLSNMYLRRQPTPTMQ
QQPSIFNQSYQPGPQNVLMTSQAPNLQINQPWVNPNPALSMDTVTINPSGVMSNLPRPNS
SRQQQPNHTSGYPHRVEHNSCENNTLPQLSMRDLQCLDTVSQVSTMNQSESQPLFHLQHQ
REELASETRAQNHLGNQNQGLQTVWPSYNVQNPVQNTFNGSAHGGGGGSQGLSTFPFLEG
MEGDDFLKGLVEGGSQTGFQLKQEPHITAGQESHAPHMQSPRESQGNTYTNLLPRPMSNG
TNMDPMRQDGSGSTQALKNLQNPYSNNGMGTEGHFSTLADWIRATRQSD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcttatgccctccatactaggggacgatccacacctaatggctgagccggcg
gtccagatcttcgagcagccaaagcagaggggaatgcgcttcaggtacaagtgtgaaggg
cgctcagctggcagcatccctggagagaagagctctgataacaacaggacttaccccagt
ctgcagatcctgaattactctggtaagggaaaggtgcgagtttacttggtgacgaagaac
gagccgttccgaccgcatccacacgatctggtggggaaggactgcaaagacggattctac
gaggccgagtttggtcctgaccgcagagtgatcgctttccagaatctgggtatccagtgt
gtgaggaggagggaagtgaaagatgcaatcgtacagaggatcaccagagggatcaacccc
ttcaatgtgccacgtgaacagctgctgcagactgaggagtacgacttgaacgtggttcgc
ctgtgcatccaggttttcctgcaggatgagaacggccactacacccgatcactcaacccc
attgtcaccaaccccatctatgacaacagggccccaaacacagcagagctgaggatctgt
cgggtcaacaggaacagtggcagtgttaaaggaggagacgagatcttcttactgtgtgac
aaagtacagaaagatgacattgaggtgcgtttcttctcctctgatggctgggaggccaaa
ggctccttctcccaggctgatgttcatcgccaagtagccattgtcttcaagactccaccc
tattacaacacctccataacagagtcggtgaccgtgcacatgcagttgcggcgaccctcc
gatcaggaagtcagcgagcccatggatttcagatatctgcccgatgacaaagatccttat
ggctacaatgagaaaaagcgcagaagagagcacttgatgaagatatcaggattgtcaggt
ggtccttttgctggtctagctatgaacaggccaaaggcagtggcacagagtagcatgagt
catatgcggaaagacctcagcaacatgtacctgagacgacagcccacacctacaatgcag
cagcaaccttctatattcaaccagtcctatcaaccagggcctcagaatgtcttaatgaca
tcacaggctcccaatttacaaatcaaccaaccatgggtaaatcccaacccagcactctca
atggatacagtcaccataaacccttctggtgtcatgagcaatctgccacgtcctaatagc
agcagacagcagcagccaaaccatacatctggttacccccatagagtggagcacaacagc
tgtgagaataacactctcccccagctctccatgagggacttgcagtgcttggatacagtc
tctcaggtgtctacaatgaaccagtcagagtcccagccactcttccacctgcagcaccaa
agggaggagctagcctctgagacccgggcccagaaccatctaggcaaccagaaccaaggt
ctccagactgtgtggcccagttacaatgtccaaaatccggtccagaacaccttcaatggg
tcagcacatggcggtggaggggggtcacaggggctgagcactttccccttcttagaggga
atggaaggggatgattttctgaagggcctggtggaaggaggctctcagactggcttccag
ctgaagcaggagccccacatcacagcgggacaagagagccatgctcctcacatgcagtca
ccaagggagagtcaaggaaatacttacaccaacttgcttcctcgtcctatgagcaatggc
acaaacatggatccaatgaggcaagatggtagtggcagcacccaggctctcaaaaatctg
cagaatccttactcaaacaacggcatgggcacagagggtcacttttcaactttggctgac
tggatcagagcaactcggcaaagcgactga
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