Lates calcarifer (barramundi perch): 108895757
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Entry
108895757 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108895757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108895757
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108895757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
DUF1045
Motif
Other DBs
NCBI-GeneID:
108895757
NCBI-ProteinID:
XP_050932398
UniProt:
A0AAJ8DUX9
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Position
LG16_LG22:complement(24798090..24874967)
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AA seq
1865 aa
AA seq
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MVDKNIYIVQGEISTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNNIKELSDIE
PNIFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSPSGQMDPTQSSTLSNNNLSGGVPFIEQGLSTSSLPASDSAGSSISSPTTTDSGLDTC
SKATSREDLSDLEQCSSSANTPSISTTLPGTEPGSPDAQSEGRQVEPAQSASVESIPEVL
EDKDSIAEQSDNTSVHDMDYVNPRGVRFTQSTQRDGASLIPYGLPCLRELFRFLISLTNP
HDRHNTDAMMHMGLQLLTVALESAHIANYQSLLGLVKDELCRHLFQLLSVDRMNLYASSI
RVCFLLFESMRVHLKFQLEMYLKKLMDIITSENVKMPYEMKEMALEALVQLWRIPSFVTE
LYINYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAYCQAKVL
SSTAQQDQSETLLAEGEGSTKSGTDTTTDLSRQSSTNGMSVPQTENAPVCPPTSGHLMAE
KMKLGRQDQGDNDAVEKRPPKKPQRFSTCLPDSQELMEIRTKKKLLITGTEQFNQKPKKG
IQFLQEKGLLSNPMDNNQVAQWLRENPRLDKKMIGEYISDRKNMELLDSFVNTFAFQGLR
IDEALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFMSNDAGFALAYAVIMLNTDQ
HNHNVRKQNIPMTVEQFKKNLKGVNGNKDFDQDMLEDIYNAIKNEEIVMPDEQTGLVKEN
YVWSVLLHRGATPEGVFLHLPPGSYDHDLFTMTWGPTIAALSYVFDKSLDDSIIQKAITG
FRKCAMIAAHYGFSDVFDNLIISLCKFTTLSNESVENLPTVFGSNSKAQTAAKTVFDLAH
RHGNILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVL
SFVNWLTLSGAEQTGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKA
LISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSFVWQTVRDHLCHLCVHANESCFLVE
RAVVGLLRLAIRLLRREDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANI
HCTDDWYTLFSLLECIGAGVKPPASFQLTSTTTDNDTGAQSDSELSSHHPSELSLDRGYT
SDSEVYTEHSKTRISRSTTDVDVASSGWLVVGKDDLDTSKTAPVSSKAQLNHPLVNQYSL
TLGQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDK
KKSHKYDSKSRLRKKAGGREKEGGGSTRRGGSRASSQRPSRSHSDEEEDEGVPASYHTVS
LQVSQDLLDLMHTLHTRAASIYSSWAEEQRHLQAAGRKIEADSQTLWTSCWCPLLQGIAW
LCCDARRQVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGG
MEETRMRGCTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESL
KNMLLVMDTAGIFHSADSRTGYSDLWEITWERIVCFLPHLREELFKQTVIPDPVPSPSRD
RAATTPSSRPPPVPVPVPVSPAETQTPSRPASPQEPPTTTTGSERPSSASPSIPPMPVPL
KTSPAQAPSPLSQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPVPLLSGPRPTSP
SDEVK
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaaaacatctatatcgtccagggtgaaatcagcactgttgttggcgctatc
aagaggaactccagatggaatactcatactcctttggatgaagaacaagaccctttactc
aacagctttggccatctaaaggaaatactgaacaacattaaagagctgtcagatattgaa
cccaacattttcctgaggcccttcctagaagtagtccgctctgaggacaccactggacca
atcacaggccttgcccttacctctgtcaacaagttcctgtcctatggccttattgatgct
aaccatgaagcagcagcagaggccattgagaacatggcagatgcagtcacacatgctaga
tttgtgggaacagaccctgccagtgatgaagttgttctcatgaaaatcctacaggtccta
aggactctgctgctgaccccagttggagcccacctgaccaatgagtctgtttgtgagatc
atgcagtcctgcttcaggatttgctttgagatgcgcctaagtgaactcctcaggaaatca
gctgaacatacactggttgacatggtgcagctgctgttctccagactaccccagttcaaa
gaggaggccaagagttatgtgggcgccaacatgaaaaagttgaagatgcgtgccggtgga
atgagtgagtcatccaaatggaagaagcaaaaacgttcaccaaggccccctcgccacatg
gtccgaagtccctctggtcagatggacccaacccagtccagcaccctcagcaacaacaac
ctttcaggtggtgtccccttcattgagcaaggcttgtccacctctagcttaccagcctca
gacagcgctggctcatccatttccagtcctacaaccacagacagcggcctggacacctgc
tcgaaagccacttccagggaggacctttctgacctggaacagtgtagctcatctgcaaac
acccctagcatttctaccacactccctgggactgagcctggctctccagatgcacagtct
gagggcaggcaggttgaaccagctcagtcggcctcagtggagtccatccctgaggttctg
gaggacaaagactctattgctgagcagtcagacaacacctctgtccatgacatggactat
gttaaccctcgtggagtccgcttcacacagtccacacaaagagacggagcgtccctcatc
ccttatggccttccatgtctaagggagctttttcgcttcctgatctcactgaccaacccc
cacgaccgccacaacactgacgccatgatgcacatgggcctgcagctgctgactgtagca
cttgagtcagcgcacatcgctaactaccagtcattactaggactggtcaaagacgagctc
tgcagacatctcttccagttgctgagtgttgatcgtatgaacctgtatgcttcttccatt
cgagtttgcttcttgcttttcgaaagcatgagagttcatctgaagtttcagctcgagatg
taccttaagaaactgatggacatcatcacatcagagaacgttaagatgccctatgagatg
aaggagatggctctggaagctctggtccagctgtggaggatccccagctttgtcaccgag
ctgtacattaactatgactgtgacttttactgctccaatctgtttgaagacctcactaaa
ctgctgtccaagaatgcgttccccgtgtcagggcagctctacaccacccacctcttgtca
ctggaggctctactcacagttattgacagcaccgaagcctactgccaggccaaagtgctc
agcagcactgctcagcaagaccagtcagaaacacttctggcagagggagaaggttcaacc
aaaagtggaactgacactacaactgatcttagtagacagagcagtaccaatggtatgagt
gttccacaaaccgagaatgcaccagtatgtccaccaaccagtggacatctgatggcagag
aagatgaaactggggagacaggatcaaggagacaatgatgctgttgagaagagacctccc
aagaagccacaacgtttctcgacatgtttacctgattcccaagaactgatggaaattaga
acaaagaaaaagctgctgatcacaggaacagagcagtttaaccagaagcccaagaaagga
atccagttcctgcaagagaaaggcctcctcagtaaccccatggataacaaccaggtggcc
cagtggctcagagaaaacccccgactggacaaaaagatgattggagagtacatcagtgat
cgcaagaacatggagctcctggacagctttgtgaacacattcgccttccaggggcttcgt
attgatgaggcactgcgactgtaccttgaggcctttagactacctggggaggctcctgtc
atccagagactcctggaaaccttcacagacaactggcataaagtgaacggctctccattc
atgagcaacgatgcaggctttgccttggcctacgctgtcataatgctgaacactgaccag
cataaccacaatgtccgcaagcagaacatccccatgactgtagagcaattcaagaaaaat
ctgaagggagtaaatggaaacaaagactttgaccaggacatgttggaggatatctacaac
gctatcaagaatgaagagattgtgatgccagacgagcagacaggtttagtgaaggagaac
tatgtatggagtgtgttgctacaccgcggtgccacaccagagggtgttttcctccacctg
ccgcctggcagctatgaccatgacttgttcaccatgacctggggtcccaccatcgctgcc
ctctcttacgtctttgacaagagccttgacgatagcatcatccagaaagccatcactggc
ttcaggaaatgcgcaatgatagcagctcactatggcttcagtgatgtttttgacaatttg
atcatctccctctgcaagttcaccactctgagcaatgagtctgtggaaaaccttcctaca
gtgtttggcagcaacagtaaggcacagacagcagccaagacagtgtttgacctcgcccat
cggcacggcaacatcctgagggagggctggaagaacatcatggactccatgctgcagctg
ttcagagctgagctcctgcccaaagccatggtcgaggtggaggattttgtggagcctaac
gggaaaatttctcttcaaagagaggaaacgccttcaaatcgtggtgagtctgccgtgttg
agttttgttaactggctgacgttgagtggagccgagcagacaggactcagaggcccgtcc
acagaaaaccaagaggccaagcaggctgccatcctctgtattaagcaatgtgacccagag
aagctgatcacagagagtaaattcctacagctggagtcactacaggagctaatgaaggct
ctgatatcagtcaccccagatgaagagacttatgatgaagaggatgctgccttctgcttg
gagatgttgttgcgtattgttttggagaaccgagaccgcgtgtcctttgtgtggcagaca
gtgcgagaccacctctgccacctttgtgtccacgccaatgagagctgcttcctggtggag
agagctgtggtgggactcctgcgactcgcgatccgcttgctacggcgagaagacattagc
tctcaggttctccactctctgcgtctcctgctgatgatgaagcctcatgtcttgtcccga
gtcagcagggaggtggcctatggccttcatgaactgctgaagactaatgcagccaacatc
cactgtacagacgactggtacacactcttctccctgctggagtgcattggagctggagtg
aaacctcccgcctccttccagctcacctccaccactactgacaacgacacaggtgcccag
tctgacagtgagctgtcctctcatcatcccagtgagctgagtttagaccgcggctacacg
tctgactctgaggtctacactgagcacagcaagaccaggatctctcgctctacaactgat
gtggatgtagcaagcagtggatggctcgtggttgggaaagacgacctggacactagtaag
actgctcctgtaagctctaaagctcagctgaatcacccactggtcaaccagtacagtctg
actctgggtcaggacttgggtcagcacgacacaaagtctctcatcaaatgtgtggaaaca
ctttctttcatcgtccgtgatgctgcccatgtcacccctgacaattttgagctgtgtgtt
agagctatccgagtgtttgtggaggccagcctaaatggaggttaccgcaatcatgataag
aagaagagccacaaatacgactccaagtcccggttgaggaagaaggcaggtggtagggaa
aaggagggtggaggcagcacaaggcgaggcggcagccgtgcatccagccaacgtccatcc
cgttcccacagcgacgaggaggaggatgagggtgtcccagccagttaccacacggtgtca
ttacaggttagtcaggatctgttagacctgatgcacacactgcacacccgggctgcaagc
atctacagctcctgggcggaggagcagcgtcatctgcaggctgcaggcaggaaaatcgaa
gccgactcccagactctgtggaccagctgctggtgcccgctgctgcaaggcattgcttgg
ctgtgctgtgatgccaggcgacaggttcgaatgcaggccctcacgtacctccagagggcg
ctgcttgttcacgacctgcagacgctcgatgcaacagagtgggagtcctgcttcaataag
gtgcttttccctctgttgacaaagctgcttgacaacataagcccagcagatgtgggtggc
atggaggagaccagaatgagaggctgcacactcctgtcaaaggttttcctccagcacctg
tctcccctgctgtccctgcccaccttcgctgccctctggctcaccatcctggatttcatg
gacaagtacatgcacgcaggatccagtgacttactgttggaggcgatccctgagtctctg
aaaaatatgctgctggtgatggacacagcagggatctttcacagcgctgactccaggaca
ggatactcagacctgtgggaaataacctgggagcgaatcgtctgcttcctgcctcacctg
agggaggagctcttcaaacagactgtcataccagatccagtgcccagccccagcagagac
cgtgcagccaccacccccagcagccgccctcccccggtcccagtcccagtcccagtgtcc
cctgcagagacacagactcccagcaggccagcatcaccccaggagcccccaaccaccacc
accggatcagagcgaccgtcttcagcctcaccctccatccctcccatgccggtgccgttg
aaaacatcccccgcccaggctccctcacccttgagccagtcgccccttatcctgcagccc
ctcgcttctcccctgcaggtgggagtcccgcccatgtccctgccaatcatcttgaacccc
gccctcatcgaggccacttcccccgtaccgctgctttctggtcccagacctacgagcccc
tccgacgaggtcaagtaa
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