Lates calcarifer (barramundi perch): 108895768
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Entry
108895768 CDS
T04895
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108895768 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108895768 (xrcc4)
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108895768 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
HAP1_N
XLF
bZIP_2
PAXX
DivIC
PH_4
MmeI_TRD
FapA
CC_CEP250
Lebercilin
Motif
Other DBs
NCBI-GeneID:
108895768
NCBI-ProteinID:
XP_018550200
UniProt:
A0A4W6FBN9
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Position
LG9:462030..483694
Genome browser
AA seq
356 aa
AA seq
DB search
MQQRLPVQLLTVRTTAFSPQNKPRDGLCEAPVMHTSVREIHVSSQPDSAYFLRVDWRGRG
LGSGFHLLLTDGQDAWRGEVSEAVVCAEAEELEMQTERYVQNLQQALTGTESSVSYSFTL
TPSPPNHSSTVTLAYEKVQKDISFRLGSVSLKSVPEPTEAVRELLVHSLQRGNTLEHQNQ
DLEEENQRLRREQQRITAELKRYTGGKETLEAELYSRFVLVLNEKKAKIRSLQETVTQLQ
ETRSSKGRKQKDSAKSDRTAGGQEEEAEDEYGGSTDEEPEEVQTTPAPTVQSRESSTAES
IGRQPEGHHGRRPQSQTPLSSPRGPGPGPADLPEKEKTEQESDNAVVTSLSSEEDR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcgcctgccggtccagttgttgacagttcgaactacagcgttttctccgcag
aacaaaccgagggacggactctgtgaggctccggtgatgcacacgtcggtgcgtgaaatc
cacgtctcctctcagcctgactccgcctacttcctgcgggtggactggagggggcggggc
ttaggttcaggcttccacttgctgctgactgacggacaggatgcgtggagaggagaggtg
agcgaggcggtggtgtgtgccgaggccgaggagctggagatgcagacggagaggtacgtc
cagaacctgcagcaggcgctgactgggacagagagctccgtcagctacagcttcaccctc
acaccgtctccaccaaaccacagctccactgtcacgctggcgtatgagaaggtgcagaag
gacatctcattcaggttgggttctgtttcactgaagtccgtcccagaaccgacggaggcc
gtgagagagttactggttcacagtctgcagaggggaaacacactggagcaccagaaccag
gacctggaggaggagaaccagagactgagacgagaacagcaacgcatcactgcagaactg
aagcgatacactggtgggaaggaaaccctggaggcagagctctactctcggtttgtcctc
gtcctgaatgagaagaaagccaagatccgcagtctgcaggaaactgtcacacagctgcag
gaaacgaggagctctaagggacggaaacagaaggattcagccaaatcagaccgaacagca
ggaggtcaggaggaggaggccgaggatgaatatggagggagcactgacgaggagccagag
gaagtgcagacgactccagctcccacggtacaatccagggagtcctctactgccgagtcc
attggacgacagcctgaaggacatcacggacgtcgcccccagtcgcaaacgccgctttcg
tcacctcggggccccggacccggccccgcagacctcccagaaaaagagaagactgaacag
gagtcagataatgctgtcgttacgtcactgagctcagaggaggacagatga
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