Lates calcarifer (barramundi perch): 108895792
Help
Entry
108895792 CDS
T04895
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108895792
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
108895792
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108895792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
108895792
NCBI-ProteinID:
XP_018550234
UniProt:
A0A4W6CII8
LinkDB
All DBs
Position
LG7_1:complement(19053189..19073823)
Genome browser
AA seq
553 aa
AA seq
DB search
MGKPKKKSDLSRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLEAQPRLVD
IIAAVPPQYRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSD
FEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPE
EYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYG
CTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGMERDVE
QFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYTPSALVDLVARILALVPPW
TRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQ
VELVRRDYVANGSWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHVYG
SVVPVSSRDPSKFQHQGFGMMLMEEAERIARDEHGSGKLAVISGVGTRNYYRKMGYELEG
PYMVKDLYRPGMD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagccaaagaaaaagagtgacctcagccgagctgagctgatgatgatgaccatt
gctgatgtcattaagcaactggttgaagctcatgaagagggaaaagacattaatctcaac
aaagtgaagaccaaaacctcagctaaatatggacttgaagcccagccccgattggtagac
atcattgctgctgttccaccgcagtaccgtcgtgctctggtgcccaaactaaaggccaaa
cctatccgcactgccagcgggatcgcagttgtggctgtgatgtgcaaacctcaccgatgt
ccccacatcagctttacaggcaacatctgcgtctactgtcctggtggaccggactcagac
tttgagtactccacacagtcttacactggttatgagccaacatccatgagagccatccgg
gcccgttatgacccctaccttcagactaggcatcgggtggagcagctgaagcagctgggt
cacagcgttgacaaggtggagttcatcgtgatgggtggcaccttcatggctttgcctgag
gagtacagagactacttcattaggaacctacacgacgccctgtcaggacacacctccaac
aacgtggctgaggctgtcaggtactctgaacgcagtaacacaaagtgtgtgggaatcaca
atagagacacggcctgactactgcctgaagcgacacctcagtgacatgctgggctacggc
tgcacccggctggagataggagtccaaagtgtatatgaagacgtggcccgcgacaccaac
agaggccacacggtgcgagctgtgtgtgagtctttccacctggcaaaggacgccggcttc
aaagtggtcgcccacatgatgcctgacctgcccaacgtgggcatggagagggatgtggag
cagttcattgagttttttgagaatccagctttcaggccagatggtttgaagctgtaccca
acactggtgatccgaggcacggggttgtatgagctgtggaagactggccggtacaagagc
tacacacccagcgccctggtggaccttgtggccagaattcttgcactggtgccaccctgg
acacgagtctaccgagtacagagggacatccccatgccgctggttagctcaggagtggag
catggcaacctgagagagctggcactggcccggatgaaggacatgggcactgagtgtcga
gatgtgagaacccgagaagtgggcattcaggagatccaccacaaagtcaggccttatcag
gtggagctggtgcggagagactacgtggccaacggcagctgggagaccttcctctcctac
gaggacccagagcaggacatcctgattggcttgctgcgtctgcgtcgctgctctccacag
tccttccgtcctgagctgaaaggaggcgtgtccatcgtccgcgagctgcacgtttacggc
agcgtggtccccgtcagcagccgagaccccagcaagttccagcatcagggcttcggtatg
atgctgatggaggaggcagaaagaattgccagagatgagcacggctctggaaaactagct
gttatctcaggcgtaggaacaaggaactactacaggaagatgggctatgagttagaggga
ccgtacatggtgaaagatctgtacagacctggcatggactga
DBGET
integrated database retrieval system
