Lates calcarifer (barramundi perch): 108895835
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Entry
108895835 CDS
T04895
Name
(RefSeq) NF-kappa-B inhibitor alpha
KO
K04734
NF-kappa-B inhibitor alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04210
Apoptosis
lcf04519
Cadherin signaling
lcf04620
Toll-like receptor signaling pathway
lcf04621
NOD-like receptor signaling pathway
lcf04622
RIG-I-like receptor signaling pathway
lcf04623
Cytosolic DNA-sensing pathway
lcf04625
C-type lectin receptor signaling pathway
lcf04920
Adipocytokine signaling pathway
lcf05132
Salmonella infection
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108895835
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108895835
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108895835
04621 NOD-like receptor signaling pathway
108895835
04622 RIG-I-like receptor signaling pathway
108895835
04623 Cytosolic DNA-sensing pathway
108895835
04625 C-type lectin receptor signaling pathway
108895835
09152 Endocrine system
04920 Adipocytokine signaling pathway
108895835
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108895835
09171 Infectious disease: bacterial
05132 Salmonella infection
108895835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108895835
04131 Membrane trafficking [BR:
lcf04131
]
108895835
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
108895835
Membrane trafficking [BR:
lcf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108895835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
CCDC162_middle
Motif
Other DBs
NCBI-GeneID:
108895835
NCBI-ProteinID:
XP_018550291
UniProt:
A0A4W6C539
LinkDB
All DBs
Position
LG7_1:17914817..17917285
Genome browser
AA seq
307 aa
AA seq
DB search
MDVHRVSNHNQMDYNLDNMEPKHGKMLPCPEDRFDSGLDSLKEDELVTEFEDMTVDAHDH
TQEYEPWRNAVTEDGDTPLHLAIIHEATEHALHMIKLSHNHPFLNLQNHQRQTALHLAVI
TEQPLLVEKLLKAGCDPRLTDDSGNTALHIACKRGSLACFGVITQNCQRHLTSIVSFPNY
NGHNCLHLASINGYISLVENLVQLGADINAQEQCSGRTALHLAVDLQNPTLVRCLLDLGA
NVNCLNYGGFTAYHLTYGRQNEEIRCQLFERTAQELRELPDSESDESDMEDLDLSEDELY
DDIKFGK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccatagagtgtctaaccacaaccaaatggattataacttagacaacatggag
cccaaacatgggaaaatgctgccttgccccgaagaccgttttgacagcggcctggattcc
ctgaaagaggacgagctggtgaccgagtttgaggacatgactgtggacgcacacgatcac
acacaggaatacgagccttggagaaatgcagtgactgaggacggtgacacgcctctccac
ttggccatcattcatgaagccactgaacatgccctccatatgatcaaactgtctcacaat
caccccttcctcaacctccagaaccaccagagacagactgccctgcacctagcagtgatc
acagagcagcccctgttggtggagaagctcctgaaggctggctgtgacccgcggttgaca
gacgacagcgggaacacggctctccacatcgcctgcaaaaggggctccctcgcctgcttc
ggtgtcatcacccagaactgccagcgccaccttacctccatcgtgtccttccccaattac
aatggacacaactgtctccacttggcatccatcaatggctacatttcactagtggaaaac
cttgttcagctgggtgcagacatcaatgcacaggaacagtgcagtggacggacggccctc
cacctggccgtagatctccagaaccccacactggtgcgttgcctcctcgacctcggtgcc
aacgttaactgcttgaactacggcggcttcacggcgtaccacctcacctacgggcgccag
aatgaagagatcaggtgccagctgttcgagaggacggcgcaggagctgagggagctgccc
gacagcgaatcagacgagagtgacatggaggatctggacctgtcggaagacgagctgtac
gacgacataaagttcggaaagtaa
DBGET
integrated database retrieval system