Lates calcarifer (barramundi perch): 108895836
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Entry
108895836 CDS
T04895
Symbol
psma6b
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108895836 (psma6b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108895836 (psma6b)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lcf03051
]
108895836 (psma6b)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
108895836 (psma6b)
Peptidases and inhibitors [BR:
lcf01002
]
Threonine peptidases
Family T1: proteasome family
108895836 (psma6b)
Proteasome [BR:
lcf03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
108895836 (psma6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
108895836
NCBI-ProteinID:
XP_018550292
UniProt:
A0A4W6CCD4
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Position
LG7_1:complement(17918727..17923022)
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQKKVPDKL
LDASTVTHLFRITDNIGCVMSGMTADSRSQVQRARYEAANWQYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMIVIGIDEEYGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLE
KKVKKKLDWTFGQTIETAISCLSTVLSIDFKPSELEVGVVTTQDPKFRILTESEVDTHLV
SLAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaggctcaagtgcagggttcgatcgacacattaccatcttctctcctgaagga
agactctatcaagtcgaatatgctttcaaggccatcaaccaaggcggactcacatcagta
gcagtcagggggaaggactgtgcggttgttgtaacacagaaaaaagtaccggacaagctt
ctggatgcctccacagtgacccaccttttcagaataacagataatatcggatgcgtaatg
tctgggatgacagctgacagcaggtcccaagtgcagcgagctcgctatgaggcagccaac
tggcagtacaagtacggttatgagattccagtggacatgctgtgtaagagaattgctgac
atctcacaagtctacacgcagaacgctgagatgcgaccactgggctgctgtatgatcgtg
atcggcatagatgaggagtatggcccccaggtgtacaaatgcgacccggcagggtactac
tgcggcttcaaggccactgccgctggagtcaagcagacagaagccaccagcttcctggag
aagaaagtgaaaaagaaactggactggacctttggacaaactattgagacggcaatttct
tgtctctcaactgttctctccattgacttcaagccctctgagctggaggtgggcgttgtc
acaacgcaggaccccaagttcaggattctgacagagagtgaagtggacacccatctggta
tccttggcagagcgggactga
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integrated database retrieval system